Coniophora puteana: CONPUDRAFT_114725
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Entry
CONPUDRAFT_114725 CDS
T03134
Name
(RefSeq) histone deacetylase complex catalytic component RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cput
Coniophora puteana
Pathway
cput03082
ATP-dependent chromatin remodeling
cput03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CONPUDRAFT_114725
03083 Polycomb repressive complex
CONPUDRAFT_114725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cput03036
]
CONPUDRAFT_114725
Enzymes [BR:
cput01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CONPUDRAFT_114725
Chromosome and associated proteins [BR:
cput03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CONPUDRAFT_114725
HDAC complexes
Sin3A-HDAC complex
CONPUDRAFT_114725
BRAF-HDAC complex
CONPUDRAFT_114725
REST complex
CONPUDRAFT_114725
SHIP complex
CONPUDRAFT_114725
MiDAC complex
CONPUDRAFT_114725
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CONPUDRAFT_114725
Heterochromatin formation proteins
Other heterochromatin formation proteins
CONPUDRAFT_114725
Chromatin remodeling factors
NuRD complex
CONPUDRAFT_114725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
NIL
Motif
Other DBs
NCBI-GeneID:
19199096
NCBI-ProteinID:
XP_007763246
JGI:
Conpu1_114725
UniProt:
A0A5M3N594
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSGFTTPLGDDTHKKRVCYFFDSDIGGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIF
RAKPATKREMTQFHSDEYVDFLSRITPSNMNSYIKEQHKYNVGDDCPVFDGLFDYCSISA
GGSMEGAARLSRDKCDIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHTRVLYID
IDVHHGDGVEEAFYTTDRVMTVSFHKYGEFFPGTGELRDVGIGKGKGYSLNFPLRDGITD
ESYKSIFEPVIQQVMDNFDPSAIVLQCGTDSLSGDKIGCLNLSMRGHGNCVKFVKSFNKP
LLLLGGGGYTMRNVSRAWAYETGLAAGVELGPEIPVNEYYEYFGPNYELDVKSSNMEDMN
TPEYLDRVKNIVFENLRHLGGPPSVQMSDIPKLPIDDAIDDVSRDFDMLPPDERRPMRLL
DSMRQADGELSDSEDEGEGGRRDHASHKERKRGSRSPSSGTEDVGGRKFGIGTGILSSGP
GTHGAGPSGHTTVVPQNLGATSMDVDDMPSNTERQPTPADVSVTNGAQGTAEAEITASAT
TTNGIAMMEDEKPAAGQPES
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcacaacccctctcggcgatgatactcacaagaaacgcgtctgctatttc
ttcgattctgatatcggaggatttcactatggacctggtcatccgatgaaacccacccgt
atacggatgtgccattcgctggttatgaactatggtttgtacaagaggatggagatattt
cgtgcaaaacctgcaacaaaacgcgagatgacgcagttccattcagatgaatatgttgac
ttcctcagtcgcataacacctagcaacatgaactcctacatcaaggagcaacacaagtac
aatgttggagatgactgccctgtatttgatggtctcttcgactactgctcaatctcggct
ggtggttcgatggagggcgcggcccggttaagcagagacaaatgcgacatagctattaac
tgggcaggcggcttacatcacgctaagaagagtgaagccagcgggttctgctatgtgaac
gacattgttctcggcatacttgagctcctcagataccacacccgggttctctacatcgac
atagatgtgcaccacggcgacggcgtagaggaagcattctacactaccgatcgggtcatg
actgtcagcttccacaagtacggcgagttcttcccaggaacaggagagctgcgcgatgtt
ggtattggcaaggggaagggctactctctcaacttcccactacgggatggtattactgac
gagagctacaagtcaatatttgaaccagtaattcaacaagtcatggataacttcgaccct
tcagcgatcgtccttcaatgcggcactgactcattatcgggggataaaattggctgttta
aacttgtctatgcgagggcacggtaattgcgtcaagtttgtcaagtcgttcaataaacca
ttactgctcctcggaggtggcggatatacgatgagaaatgtcagccgcgcatgggcttac
gaaacaggacttgccgcaggagttgaacttggaccagaaatcccggtcaacgagtattac
gaatacttcggtcccaactatgagcttgacgtcaaatcttcgaacatggaagacatgaac
accccggagtatttggacagagtcaagaatatcgtgttcgagaatctacggcaccttggt
gggccgcccagcgtgcagatgtcagatatccccaagctaccgattgacgatgctatagac
gatgttagtagagacttcgacatgcttccgccggacgagcggcggccaatgcgtttgctc
gactcaatgagacaggcagacggtgaactttccgactcggaagacgagggcgagggtggt
cgaagggaccacgcaagccacaaggaacgcaaacgggggagtagaagtccctcgagcggc
acagaagatgttgggggacggaaatttgggatcggcacgggtatcttatcgtcaggtcct
gggacccacggcgccgggcccagcggacacacgaccgtggtgccgcagaacctcggtgca
acatccatggatgtggacgacatgccctcgaacacagaacgacaaccaactccggcagat
gtatcggtcacaaacggagcccagggtactgcggaagccgaaattacagcatcggcaaca
actacgaatggcatcgcgatgatggaggacgaaaagccagcggctggacaacctgagagc
tga
DBGET
integrated database retrieval system
