Coniophora puteana: CONPUDRAFT_136662
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Entry
CONPUDRAFT_136662 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_136662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_136662
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_136662
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CONPUDRAFT_136662
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CONPUDRAFT_136662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
Zn-C2H2_12
zf-C2H2_11
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
19200933
NCBI-ProteinID:
XP_007767889
JGI:
Conpu1_136662
UniProt:
A0A5M3MSG0
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MSVYQNSYQASYTGPQYSRPGTSYPQYQQHPPPHLPYYHVDPHSFRREFSARLAELTINS
RPLIQNLSRLAQEYMQWADAVGQCLEPHIRKVPVWMKLPAFYLLDAIAKNVYEPYARLFS
GFVINLFLETYQQVDQATRSKMEEMLLTWRTAAPSGRELFGIATQRSIERGIWGGGDDNG
SSTTTNGHGSHPVSKAQVLSELEFILSQKERALQTSPWDTMCQKHVEILLQLRRLVDTGP
GVSQNELQQILNQLRSLSRTSSSVVPPQVAHPPQQLPSYPPPPATYQYPPVYPPATQGSS
NHSPESASSAYGYPSQPHPAPPSIPTTSGPSPQTTDIANLFNAIVKAGVLPGASVSSNKS
EAKPRSAEVASESILAYRTAILSQSIQLTNADITRKRPDIVHLLYDRLPVQCKQCGTRFT
SDTNGKKDMEDHMDMHFKQNRKASQNVGRGHSRSWFVNLDDWLDEKGKGRGRPANAKAFA
VAEAAEHDANLRSQYVVVPSGEEAMPISCPICKESLKSEFLEDDEEWVWKNAVKRDDRIY
HATCHAEAASTMQTLASRLRTETTGRSRSTTPDIKMGSSTPPKAILGLRTSLSPSPDSKR
LALKRKADNTPPPSAHPSDEQGTPPNKKVALAA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatatcagaactcgtatcaggcgtcgtataccggccctcaatattctcgacca
ggcacctcgtacccccaatatcagcaacatcctcccccacacctaccttactatcatgtc
gacccccattcattccggcgtgaattcagcgctcgcctagcggaactgaccattaattct
aggcccttgatacagaatctttctcgacttgctcaggaatatatgcaatgggcagatgct
gtgggccagtgtcttgaacctcatattcgaaaggtcccagtttggatgaaactgcccgca
ttttacctcctcgacgccatcgcaaagaatgtctacgaaccctatgcccgccttttttcg
ggtttcgtcataaatcttttccttgaaacttatcaacaggtagatcaggcaacccgcagc
aagatggaggagatgctcctgacctggcgaactgcagcgccaagtggacgggagctattt
ggtatagctactcagcgatctatagagcgcggcatatggggcggaggcgatgataacgga
tcttcaactacaacaaatggtcacggttctcaccccgtttcgaaggctcaggtcctcagc
gaacttgaattcatccttagccagaaggagcgggcgttacaaacgagtccttgggatacg
atgtgtcagaaacacgttgagattttgcttcaacttcgacgtctggtagacacgggtcca
ggcgtgtcgcagaacgaacttcagcaaatattaaaccagctgagatcactatcgagaact
tcaagctcagttgttcctccgcaggtcgcacatccacctcaacagcttccttcataccct
cccccaccagcaacttaccagtatccgcctgtgtacccgccagctacccaaggttcttcg
aaccattccccagaatcggcatcaagtgcatatgggtacccttcgcagcctcatcctgcc
ccgccatctatccccaccacttctggtccgtcgccccaaacgaccgatattgcaaatttg
ttcaacgccatcgtgaaagctggcgtgcttccaggtgcttctgtcagttccaacaaatct
gaggcgaagcctcggtcggctgaggtggcatctgagtcaatcttggcttaccggacggcg
atcttatcccagtcaatccaattaactaacgctgatatcacaaggaagcgccctgatatc
gtccatctcttgtatgatcgccttcccgtgcaatgtaagcagtgcggaacaagatttacg
agcgacaccaatggcaagaaggatatggaagaccacatggatatgcacttcaagcaaaac
cgtaaggccagtcagaacgtcggtcgtggacatagcagaagttggttcgtcaaccttgat
gactggttggatgagaaaggaaaaggccgaggccgtcctgctaatgccaaagccttcgct
gtagcagaggccgctgagcatgatgctaacttgcggtcgcagtatgtagtagtgccctcg
ggtgaagaagccatgcccatctcatgtccgatttgtaaggaaagcctgaagtctgagttc
cttgaggatgatgaggagtgggtttggaagaatgcagtgaaaagggatgataggatatac
catgcaacgtgtcacgctgaggcggctagcaccatgcagaccctagcttctcggttacgt
acagagacaaccggccgtagtcgatctacaacgcctgacatcaagatgggttcgtcgact
ccgcccaaagcaatcctgggcttacgtacttcgctatctccttcacctgattctaaacgt
ctagcgctgaagcgtaaggctgacaacacgcccccgccgtctgcacatccttccgatgag
caagggacaccacccaacaagaaagtagcgcttgcggcgtga
DBGET
integrated database retrieval system
