Coniophora puteana: CONPUDRAFT_89143
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Entry
CONPUDRAFT_89143 CDS
T03134
Name
(RefSeq) Ssl1-domain-containing protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cput
Coniophora puteana
Pathway
cput03022
Basal transcription factors
cput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CONPUDRAFT_89143
09124 Replication and repair
03420 Nucleotide excision repair
CONPUDRAFT_89143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_89143
03400 DNA repair and recombination proteins [BR:
cput03400
]
CONPUDRAFT_89143
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CONPUDRAFT_89143
DNA repair and recombination proteins [BR:
cput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CONPUDRAFT_89143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
DZR_2
Motif
Other DBs
NCBI-GeneID:
19211305
NCBI-ProteinID:
XP_007766999
JGI:
Conpu1_89143
UniProt:
A0A5M3MWT6
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MPPRRNDDAMEVDSDSDLELNLLANSRAKGKGKAADKQKKDKGKSKAKELAYTWEASYTR
SWDTVQEDEAGSLQGAVEDWVARSRRRRLLAPANAIRRAIIRHLILLIDLSSSMLDRDMR
PTRFDLTLEYTREFITEWFDQNPLGQIGVVGMRAGVGERIGEMSGNPQEVLGSIADRHKI
EPTGEPSLQNAIEMARNGMSHLPTHSSREILIVIGSLTTCDPGNIHDTLDSCVKNKIRVS
VVALAAEMKICRELCDKTGGQFGVALNEGHFKDLLFELVPPPAQRAVNRAGGGAGSTSAD
LMMMGFPTRLPDTTPPSLCVCHSDLKSEGFLCPRCMAKVCDVPTDCDICGLMIVSSPHLA
RSYHHLFPVRPYQAM
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgtcgcaatgatgatgcgatggaagtcgactcggactcggaccttgagctg
aacttgctggccaactctcgcgccaaaggcaagggcaaagctgcagacaagcagaagaag
gacaagggaaagagcaaggccaaggaactagcctatacgtgggaggcatcatatacacgc
tcatgggataccgttcaggaggatgaggctggtagcttacagggcgcggtggaggattgg
gtcgcgcggagcagacggcggaggctgctcgcacccgccaatgcaattcgaagagcaatc
attcgacacctcattttgctcatagacctctcgagctccatgttggaccgagacatgcga
cccactagatttgatctgacactcgagtacacccgcgaatttatcacagagtggtttgac
cagaacccgctggggcaaattggagttgttgggatgcgagctggggtaggagagcgcata
ggagagatgtctgggaatccacaggaagtcctaggctccattgcagatcgacataaaatc
gaaccgacgggtgaacccagtcttcagaacgcgatcgagatggctcgcaatggcatgagt
caccttccgacgcactcgtctcgcgagattctcatcgttattggctcccttacgacatgc
gacccgggcaacatccatgatacgctcgattcatgcgtgaaaaacaaaattcgcgtgtcc
gtagttgcgttggctgctgaaatgaagatatgtagggaactctgcgataaaactggaggt
cagtttggcgttgccctgaacgaagggcacttcaaggatctcctcttcgaactcgtccct
ccacccgcgcagcgtgcagtcaatcgtgccggcggaggagcaggaagtacctcggcagac
ctcatgatgatgggcttcccgacgcgactgccagacacgaccccaccgagtttgtgcgtg
tgtcactctgacctgaagagcgaagggttcctgtgtccgcggtgtatggccaaggtgtgc
gacgtcccaacggattgcgacatttgcggcctcatgattgtgagctcaccacatttggca
cggagctaccaccatttgtttcctgtgagaccatatcaagctatgtga
DBGET
integrated database retrieval system
