Cryptosporidium parvum: cgd1_1310
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Entry
cgd1_1310 CDS
T00168
Name
(RefSeq) cleavage stimulation factor subunit 2 that has a CSF1 like RRM domain
KO
K14407
cleavage stimulation factor subunit 2
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
cgd1_1310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpv03019
]
cgd1_1310
Messenger RNA biogenesis [BR:
cpv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
cgd1_1310
U7-dependent histone pre-mRNA processing factors
cgd1_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
partial_CstF
CSTF2_hinge
UPF0738
Motif
Other DBs
NCBI-GeneID:
3371363
NCBI-ProteinID:
XP_627975
ApiDB_CryptoDB:
cgd1_1310
UniProt:
Q5CSU2
LinkDB
All DBs
Position
1:318181..319095
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AA seq
304 aa
AA seq
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NNLSLVGNVPFDATEDELREVMNSAGPVLSMRIVHDKDTGLSRGFSFCEYRDIETCIMAI
KSLNGYELRGRSIRVDWASQDMRSRYNHLVVNNTSGTAPVTATTQGGIGMGQQGTEGLHH
PISLTAPSHVQQIQEDGTSMPSIPNNNANFDNISSEIIQLVQGMTVSQLYYLIGHMQKLV
VQNPETARSILLDNPQFCYALLHSQFILGMVNEPFVPLNQEQLNKANEIRTKVLTLRNEN
SNINIKNLGEDVSVLIEEIANNPNPALLQALASIQPNSVAQWTEEEKSKILAIQQALKNR
GLIN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
aataacttatctttagttggaaatgtaccatttgacgctacagaagacgaactaagggag
gttatgaattcagctggtcctgttctgtcaatgagaattgtgcatgataaggacactgga
ttgagtcgtgggttctctttttgcgaatatcgtgatatagagacttgtattatggcaata
aagagtttaaatggatacgaattaagagggagatctattagggttgactgggcaagccag
gatatgagaagtagatataatcatttagttgtaaataatacatctggtacagctcctgta
acagcaacaactcaaggtgggattggaatgggacaacaaggaactgaaggcttacatcat
ccaatatctttaacagcgccatctcacgttcaacaaattcaggaggatgggacatctatg
ccttcaatcccaaataacaatgcaaattttgataatatttcgtcagaaattatccaactt
gtacaaggaatgacagtttctcagttatattatttgataggccatatgcaaaaacttgtt
gtccagaatcctgaaactgcaagaagcattttacttgataatcctcaattttgttatgct
cttcttcactctcaattcattttaggtatggttaatgaaccatttgttccacttaatcaa
gagcaacttaacaaagcgaatgaaatcagaactaaagtattgactttaagaaacgaaaat
tctaatattaatattaaaaatttgggagaagatgtttctgttcttattgaggaaattgca
aacaacccaaaccctgcattacttcaagcattggcttcaatccagccaaattccgttgcc
cagtggactgaagaagaaaaatctaagatccttgcaatccaacaagcactaaaaaatagg
gggctaattaactaa
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