KEGG   Cryptosporidium parvum: cgd3_3820
Entry
cgd3_3820         CDS       T00168                                 
Name
(RefSeq) DNA LIGASE I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03030  DNA replication
cpv03410  Base excision repair
cpv03420  Nucleotide excision repair
cpv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    cgd3_3820
   03410 Base excision repair
    cgd3_3820
   03420 Nucleotide excision repair
    cgd3_3820
   03430 Mismatch repair
    cgd3_3820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpv03032]
    cgd3_3820
   03400 DNA repair and recombination proteins [BR:cpv03400]
    cgd3_3820
Enzymes [BR:cpv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     cgd3_3820
    6.5.1.6  DNA ligase (ATP or NAD+)
     cgd3_3820
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     cgd3_3820
DNA replication proteins [BR:cpv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    cgd3_3820
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     cgd3_3820
DNA repair and recombination proteins [BR:cpv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     cgd3_3820
   NER (nucleotide excision repair)
    Other NER factors
     cgd3_3820
   MMR (mismatch excision repair)
    Other MMR factors
     cgd3_3820
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 3373851
NCBI-ProteinID: XP_626929
ApiDB_CryptoDB: cgd3_3820
UniProt: Q5CU85
LinkDB
Position
3:949723..952200
AA seq 825 aa
MTGKCLDSLFNEEDDMNEIIETEDSIIDSKETIINEKISLDSILGRELMSNVKKDEKRSK
KIKLDSNIQQKLSFNFGTGNTPSSVNKSKPTKLEKVPENEESGDSCTKNGSESLSKKIKP
SNAGLFSPFSINITTGDEDIQSPMFDPCNISKEKIMAKGKSNSILFSVLTDAFSRIEQLK
GSGSGSKKGCIVILANLFRLIIHHNPSDLIDAVYICMNKVAPDYEGKESGVGDSILIKCI
SESSDKSEKRIKEDQISGKFEDLGEIAAICKKQMRLLFEPQRLTIHDVYSDLYSLTEITG
KQSQQLKKDKIKKLLVSGKQDEVKYIVRFLQGRLRIGIQQTTVYQALASAFVLTKNIPGD
NLASFSDYRLAKNEKKYKNLQELDCEILEMETSLRSSLCQLPNIEKIINVAIQGASSDEI
SAKCKLTTGIPCEPMLARPTKGIQDVLNRFENFLFTAEYKYDGERAQIHVYKDKSNKRVI
KIFTRNLESATDRYPDLIQYLNQSLNSSVEDCILDSEVVAYSKSEDKILPFQVLSTRKRK
NVAFDDIQIQICLMLFDCMGFNGESLLKKSLFERRQYLRKCINEGQSEYIKFTTSTETNK
LDHLDSFLSESIENNCEGLMVKTLHDNASYEPSKRSLNWLKIKKDYVDGLTDSIDVVPIA
ACYGKGKRNGVFGTFLLAVYNTEEEVYETVCKAGTGFSDEILQSLYTSLKDHIIAEGAPK
SYYKFDSSGQLSSLKQDVWFEPKFVWEVKGADLSLSPVHTAAIGTIDENRGIGLRFPRFI
RIRDDKSPEQATSSIQIMEMYNSQLITNNTKNETNFSDDQFQEDD
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgaccggtaaatgcctagattcattatttaatgaggaagatgatatgaatgaaattatt
gaaacagaggattcaattatagattcaaaggaaacaattattaatgaaaaaatatcccta
gatagtattttaggaagagaattaatgagtaatgttaagaaagatgagaaaagatccaaa
aaaataaagttagactcaaatattcaacaaaagttatcgtttaattttgggactggaaac
acaccttctagtgttaataaaagtaagcctacaaagcttgagaaagttccagagaatgag
gaaagtggagattcttgtaccaagaatggatctgaaagtttaagtaaaaagataaaacct
agtaatgcaggcctcttttcaccattttctattaatattacaacaggagatgaagacatt
caaagtccaatgtttgatccttgtaatattagcaaggaaaagataatggcaaaagggaaa
agtaattcaatattattttctgtgttgactgatgccttttcaaggatagagcaactaaaa
ggaagtggatctggtagcaaaaagggttgtatagtaatcctagcaaatttatttcgactg
ataatacatcataatccaagtgatttaattgatgcagtttatatttgtatgaataaagtt
gctcctgattatgaagggaaagaatcaggagttggtgattctattctaataaaatgtata
tcagagtcttctgataagtcagagaagagaattaaagaggatcaaattagtggaaaattt
gaagatttaggtgaaattgcagcaatctgcaagaaacaaatgaggcttctttttgaacca
caaagattaacaatacacgatgtttatagtgacttgtattcacttacggagatcacaggt
aaacaatctcaacaacttaagaaagataagatcaagaaattattagtttctggcaaacag
gatgaagttaaatatatcgtaagatttttacagggaagattaagaattggaatacaacaa
accactgtttatcaggcattagcaagcgcatttgtgttaacaaagaatattccaggggat
aatttggctagtttttctgattatagacttgcaaaaaatgagaaaaaatataagaatcta
caagaattagattgcgaaatactcgaaatggaaacctcacttagatcatctctttgtcag
cttccaaatatcgaaaagatcattaatgttgccattcaaggagcctctagcgatgaaatt
tctgctaaatgcaaacttaccactggaataccttgcgaacctatgcttgcaagacctaca
aaaggcattcaagatgttctaaatagatttgaaaactttctttttactgctgagtataaa
tatgatggtgaaagagctcaaatacacgtatataaggacaaatctaataaaagagtgatt
aaaatcttcactcgtaatttagagtctgctactgataggtatccagatttgattcaatat
ttaaatcaatcactcaattcgagtgtagaagattgtattttagactctgaagttgttgca
tactctaaaagtgaggataagattttaccatttcaagttctgagtacaagaaaaagaaag
aatgttgcttttgatgatatacagatacaaatatgtttaatgctttttgattgcatgggg
tttaatggagaatctttactaaaaaagtcactctttgaaagaagacaatatttgagaaaa
tgtatcaatgagggtcaatctgagtatattaaatttactacaagtactgaaactaataaa
cttgatcatttagattctttcctttctgaatctattgaaaataattgtgagggactcatg
gttaagactttgcatgataatgcaagctatgaaccttcaaaaagatctcttaactggtta
aaaattaagaaagattatgtggatggacttactgatagtattgatgttgttcctattgca
gcatgttatggaaaaggtaaaagaaatggggtttttggaacttttctattagctgtttac
aatacagaggaggaggtatatgaaactgtatgtaaggcaggaacaggattttctgatgaa
attttacaatcgttatacacaagtttgaaagaccatattattgcagaaggtgccccaaaa
agttactataagtttgactcaagtggacaattatcttcactcaaacaagatgtttggttt
gaaccaaaatttgtatgggaagttaaaggtgctgatttatcactatctcctgtgcataca
gcagctataggcactattgatgaaaacagaggaataggacttcgatttccaagatttata
agaattagagatgataagtctccagaacaagctacttcatcaattcaaattatggaaatg
tataacagtcaattgataactaataatacaaagaacgagaccaatttcagtgatgatcaa
ttccaagaagatgattag

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