Corynebacterium pseudotuberculosis I19: CPI19_01205
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Entry
CPI19_01205 CDS
T01878
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cpx
Corynebacterium pseudotuberculosis I19
Pathway
cpx00521
Streptomycin biosynthesis
cpx00523
Polyketide sugar unit biosynthesis
cpx00541
O-Antigen nucleotide sugar biosynthesis
cpx01100
Metabolic pathways
cpx01110
Biosynthesis of secondary metabolites
cpx01250
Biosynthesis of nucleotide sugars
Module
cpx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CPI19_01205 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CPI19_01205 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CPI19_01205 (rfbD)
Enzymes [BR:
cpx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CPI19_01205 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CPI19_01205 (rfbD)
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Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
AP_endonuc_2
DHquinase_II
Motif
Other DBs
NCBI-ProteinID:
ADO25525
LinkDB
All DBs
Position
complement(245330..246712)
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AA seq
460 aa
AA seq
DB search
MNIETCPIQGMMVIHLDLHEDSRGWFKENWQESKLVGLGFTGFRPVQNNISFNAEAGVTR
GLHAEPWDKYVSVATGSVFGAWCDLREGSATFGATFTITITPETAVFVPRGVANGFQALE
ATAYTYLVNDHWAPDAHYSFVNLADPALNISWPIPLDQATLSKKDTAHPPLASAVPVPPK
KVLVTGANGQLGRTLKKVFPHAEFCSRTDLDITTDITEARRWADYSVIINAAAYTAVDAA
ETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDGELPVHSEQEPFSPLSVYGQS
KAAGDTAVSVAPQHYVVRTSWVVGEGNNFVSTMLSLAARRISPQVVNDQLGRLTFTEDLA
AGIRFLLDNHAPYGVYNLSNSGEIVSWAQLAQRVFTLAGRSASDVQPVSTTEYFAGKAPA
APRPRHSALDLSKITGLGFTPRDWQDALASYCTTLDAKEG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagaaacctgccctatccagggcatgatggtcatccatctcgacttgcatgag
gactctcgcggctggttcaaagaaaattggcaagagtccaagcttgtcggcttaggattc
accggtttccgaccagtgcaaaacaatatttcctttaatgctgaggccggagtaacccgc
ggtttacacgcagaaccatgggataaatacgtctccgtagcaaccggctcagtctttggc
gcctggtgcgatttacgcgaagggtccgcaacgtttggcgccacatttaccatcaccatt
acccctgagaccgctgtctttgttccgcggggggtggccaacggattccaggctcttgaa
gctaccgcatacacctatttagtcaacgaccactgggcaccagacgctcattattctttt
gtcaatcttgctgatcctgcattaaacatttcttggccgatccccctcgatcaagcgacc
ctttccaagaaagacacggcgcaccctccgctagcatcagcggtacccgtaccacccaag
aaagtactggttaccggggcaaacgggcagcttggcaggactctaaaaaaggtcttcccc
catgccgagttctgctctcgcaccgacttagacatcactacagacattacagaggcgcgt
cgctgggctgactacagcgtaattatcaacgccgcggcctacacagctgtcgacgccgct
gaaactgattcaactgctgcttggcgtaccaacgcggaagctcctgctcgccttgccgcg
attgctgctcgatacgggatcacactggtgcatctctctagcgactatgtctttgacggc
gaactccctgttcacagtgaacaagaacccttcagcccgctgagcgtctatgggcagtcg
aaagctgctggcgatactgctgtaagcgttgccccacagcattatgtagtgcgcaccagc
tgggtggtgggagaagggaataactttgtatccacgatgctctcccttgccgcacgcagg
atctctccccaggtggtaaacgatcagctaggcaggctcacctttactgaggacctggcc
gcaggtatccgatttttgctcgataatcatgccccttatggggtgtataacctcagcaat
tctggggagattgtgtcctgggcgcaactagcacaacgggtatttacgctggcggggcgt
tcggcttccgacgttcaaccagtaagcacaaccgaatattttgcaggaaaagcacccgct
gccccgcgtccccgccactcagccttggacttgagtaaaatcacgggactcgggttcacc
ccacgtgattggcaggatgcactcgcgagctactgcaccacactggatgcaaaggaaggc
taa
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