Cherax quadricarinatus (Australian red claw crayfish): 128686151
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Entry
128686151 CDS
T09502
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03022
Basal transcription factors
cqd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128686151
09124 Replication and repair
03420 Nucleotide excision repair
128686151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128686151
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128686151
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128686151
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128686151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
FYVE
Motif
Other DBs
NCBI-GeneID:
128686151
NCBI-ProteinID:
XP_053628853
EnsemblRapid:
LOC128686151
LinkDB
All DBs
Position
11:complement(60541882..60573777)
Genome browser
AA seq
394 aa
AA seq
DB search
MHEEEDPKEYRWESGYEKTWEAIQEDESGRLEPSVTEMIQRAKRRRLLDREASVRLGIMR
HVYIILDVSQAMTEQDLKPTRQSCTLKILEDFIKEFHEQNPISQLGIITTQNKTAKRQSE
LSNNPQRHLECIKKLQDLPARGEPSLQNSLEVALSSLRHLPPHTSREILIIFAALTSCDP
GEIGATIQKVKDANIRVSVVGLAAELHVCKDISQETGGSFSVCINDLHLKELIHDHLEPP
PASVKMDHTLIKVGFPHQINADAKPALCMCHLDDSPPLNTRGYYCPQCTAKYCDLPAECR
VCGLMLVTAPHLARSYRHLFPLKQFDEVLVEETTAKNCYGCLKHFTETAADKKVYVCRTC
RQVFCFNCDIFLHETIHSCPGCASNPTISQYNTS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagaggaagatcctaaagaataccggtgggagagtggatacgagaaaacatgg
gaggctatacaagaagacgaatctggccgcctggagccatcggtgacagagatgatacag
cgagctaagcggaggagattgttggatcgagaagccagtgtgaggctaggaataatgcgg
cacgtctatattatcctggatgtgtctcaagcaatgacagagcaggatttgaaacctaca
cgacagagctgcactctgaagattcttgaggattttattaaagaatttcatgagcagaat
cccattagtcagcttggaataattactactcagaataagactgccaagagacaaagtgaa
ctcagcaataacccacaaaggcatctagagtgtatcaagaaactacaagatctgcctgcc
agaggagagccctcactacaaaattctctggaagtagcactgtcatctctgcgccattta
ccacctcacacttctcgagagattctcatcatctttgcggctctgacttcctgtgacccg
ggggaaattggagctactatacagaaagtgaaggatgcaaatattcgtgtgtcagtggta
ggtcttgcagcagagctccatgtttgcaaagacataagtcaagagacaggtggctccttc
tcagtgtgtattaatgatctccacctgaaagagttgatccatgaccacttggagcccccg
cctgcctctgttaaaatggatcatacactcattaaagttggctttccacatcaaattaat
gctgatgccaaacctgctctatgcatgtgtcacctggatgactcgccacctctcaataca
cgtggctattactgcccccagtgcacagccaagtactgtgatcttcctgctgaatgtcgt
gtgtgtggcctcatgttggttacggcaccacatcttgcacgatcttacagacatctcttc
ccactgaaacaatttgatgaggtgctggtagaagaaactacagccaagaactgttatggg
tgcctgaagcattttacagaaactgcagctgataaaaaagtgtatgtgtgtagaacatgc
aggcaagttttctgctttaattgcgacatatttcttcatgaaacaattcactcctgccca
ggatgtgcttctaatcctacaatatctcaatataacacaagctga
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