Cherax quadricarinatus (Australian red claw crayfish): 128696831
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Entry
128696831 CDS
T09502
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqd03036
]
128696831
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128696831
microRNA pathway
RISC loading complex
128696831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
dsrm
Motif
Other DBs
NCBI-GeneID:
128696831
NCBI-ProteinID:
XP_053644192
EnsemblRapid:
LOC128696831
LinkDB
All DBs
Position
52:19637601..19717237
Genome browser
AA seq
2506 aa
AA seq
DB search
MNRVQPENVHSTIFTPREYQVELVDVCLRRNTLSVLASRSTRTFLITMVTRELAHLTRSK
EQGGKEQRTLITGWSGPGLVRAGEAIQQNTNLVVTTYTTLDQVDNWPSSRWSQAFREAQV
LIMTVDVLEQGLQAGVLPLDMLNLLVITDAHRMATSPTIAKVLNRCGNSRILGMTSPVLS
HSCSPPQLESFLNHLQKASSCKVDTASEIVTVLRYVNKPVEKIVMCRDPSPDERLEVELE
VRRLVGDALRFLDDHRYDLVEVYGPEYQEFCDGLPDPNNEPRQILMDFLDVLNNLGLWCA
DRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEQAFDKYTELDQILKFSTP
KVLRLVEILREVRPLNFIDPRKRRDKLENTEITKTGTAVDGTETIDAKSVEDSKTAIQNT
LEDTKEDDNLNVKASSNFLEITGELSENSVAQNNLKNILQPSENLDEMELAEEVINDEMS
KSISENSKNLLENTKSEIRLVNETVCETVPKSSCKNKMCDYIVSESVCESPSKLTLLSSV
TSDSSVKSELPGKETDKTMEVCGEFTCNGCISVSEDINETGDVSDDAELYTPAPKLSTEC
TSKAVSKSYTSDFECYTSEIDTNECKIALSGSLEEVKTKEFSGEDIIQNCIKQECDHVQN
GSIVCIDSMQSKVQMDPDSQICCNILEAVDNKKSKDGSVLEDNLCRLNVKKSSCIDGCEL
EILSCDPCNGLLSAKSELQDTANIQNIKNVMLCNGFAHGSHNGLSSRISDDVDCKLNGHI
DLDKLPSSRKGESDSVSIAKADTECCASVQNQFSMETCCDSIAETSASLATSKLPCEAVS
ALATHVNITTNSHNEIMIEEIGDQVDSSDSLEENSTPEQSKITPPPKTCTESVDSCPGNS
NTGLNSSNEMEETSSTAPVVSSEAAAMADTLALLLPSGGKGRKRRDDVKEKVKVHNPEDP
DSVCGLIFVHHRNMAKIIYRLLKELSDIGGDYAWIFPQYTVEAKESVKDDPRAAEAEHKK
QEEVLRRFRHHECNVLVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFY
FHLITKMQEKSFLCDMATYSAFQQVLVSRCGSVEVGTDVEVMAEEANGAYPSYLTPANTA
VTMASAIGLLNKYCAKLPSDTFTRLTAMWEIEENEDSIGSYCCRIMLPINSPLKGTIQGP
WQEKVSLAKMAAALECCRSLHQIGELDDQLQPVGKESMKLDDHLCAPPADDQVPEGMPRP
GTTKRRQYYYKKVAECLTGEQPKEKLDLFVYKLDMVLTCPIPDEQNTRGRKIYRPEKSTR
SFGIVTTKPISQVSGFPVFTRSGEVVVHVRETGRREQFTQDQLAALQCFHKFTFTHVLRL
EKYPIKFDPTNARTAFYIVPLNKFEGREDIDWEFVTKIQLEGDPRPVPPLDDTRKKFQFQ
HCLYEDAVVMPWYRNQDQPQYFYVAEICTHLNPQSDFPDAGFETFEKYYLTKYGLQICNL
SQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTIHPF
PASLWRKAVCLPTILYRINALLLADQLRICVASEVGLGLQILPSDFSWPPLDFGWSLADV
LKKSQDNQIQEDSTEHKTESVTKQKGKITESLGNESPPVKKKISKNGIDMEIGTWSNDMA
VDPPTPPYSIDDMNPADDFEIDTFDPNVALPDNLTLLDGFTNVDDDIEGELGADWGTGIT
ERRSKNGCHKDSSGEVFRVGSPSNFEIDGWDVFGGPGSSGYGGGYNGYGSYDAYGGYGDF
QGLADDLEGCESDVSSDMDDDDKSQAEKMWDDEGSKRRTSMAIDEGSSDEEIDLQWPYED
DIVKAEKEEEFHLFLEEKQCAILESSCYLAENAPLVIEKAHRKLANENKMSSPEKVSLPV
DKFTLQGCEPLSSKGCDNAQQTTSPATRIVNRTETLSLVKLDNGADSFSGKSNSGETLFS
FDYQPDLINHPGPPPSIILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRH
EGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSG
VPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKTEHITSELMATQNPHDLPIFIPY
NLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCKIDEESENVLHIT
YGHLEPPQSPLHQCSVTDTYMQLELLLSGYMVFEEKIGYTFRDRSYLLQAFTHASYYKNR
LTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDFHK
YFRHFSPGLDRVVRDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAG
AIFLDSGGSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGK
VRVSVEIFGKGSFSGVGRNYRIAKSTAAKRALRHLKKLQMMTSQGI
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggtacaaccagaaaatgttcactcaactatatttactcctcgtgagtatcaa
gtggagttggtggatgtttgcctacgacgaaacacactctcagtattggcatctcgctcc
actaggacattccttatcaccatggtgactcgagagctggctcacctcacccgaagcaaa
gaacaaggtggtaaagagcaacgaaccttaatcactgggtggtcaggaccaggacttgtt
cgtgcaggagaagccattcagcaaaataccaaccttgtggtcaccacctacaccacactt
gatcaggttgataattggccatcatctcgctggagtcaggcttttagagaagcacaggtg
ttaataatgacagtggatgtgctggagcaaggcttgcaagcaggagtcttaccactagat
atgctcaaccttcttgtcattaccgatgctcaccgaatggcaacttctcctactattgct
aaggttctaaatagatgtggaaatagccgaattctaggcatgacttctcctgtattaagt
cattcttgctctcccccacaacttgaatccttcctaaaccaccttcagaaagcctcctct
tgtaaagttgatactgcctcagaaatagtcactgttttaaggtatgtaaataagcctgtt
gagaaaattgtgatgtgtcgtgatccttctccggatgaacgtttggaggtggagctggag
gtacgacgtctagtaggggatgctctcaggtttcttgatgatcatcgatatgatcttgtg
gaagtgtatggaccagagtatcaagagttctgtgatggtttacctgatcctaataatgaa
ccaaggcaaatcttgatggatttcctggatgtgctcaataatttagggctgtggtgtgct
gatagagcagcattgtatgctttagttgaagtggagaagttgaagaagaaaactgcttat
gatcgtcactacctcctactctgcatgatctttacagttatggcacgaataagggctgta
gtagagcaagcatttgataaatacacagaacttgatcagattttgaaattttcaactcct
aaagttcttcgtttagtggaaatccttcgtgaggtgcggccactcaattttattgatcca
cgtaagagaagagataaattggaaaatactgaaattactaaaactggaactgctgtagat
ggaactgaaaccattgatgccaaatctgtagaagacagcaaaactgccatacagaataca
ttagaggatacgaaggaagatgataatttgaatgtgaaagccagttctaattttcttgaa
atcacaggtgaattatcagaaaacagtgtggctcagaataatttaaaaaatattcttcaa
cccagtgaaaatctcgatgaaatggaattagccgaagaagtaataaatgatgaaatgtcc
aagtctattagtgaaaattcgaaaaacttgttagaaaatacaaaatctgaaattaggtta
gttaatgaaactgtatgtgagacagttcctaagtcatcttgtaaaaataagatgtgtgat
tacatcgtaagtgaaagtgtgtgtgagtcacctagtaaattaaccttgctgagctcagtt
actagtgactctagtgttaaatcagaattaccagggaaggagactgacaaaacaatggaa
gtttgtggagagttcacatgcaatgggtgtatttctgtcagtgaagacataaatgaaact
ggtgatgtgtcagatgatgcagaattatatacacctgccccaaagttatctacagaatgt
acaagcaaggctgtgtccaagtcatacacaagtgattttgaatgttatactagtgaaata
gatactaatgaatgtaagatagctctgtcaggatcactggaagaagttaagacaaaagag
ttcagtggtgaagatataattcaaaattgtataaagcaagagtgtgaccatgtacagaat
gggagcattgtgtgtattgacagtatgcaaagtaaagtacaaatggatcctgattcacaa
atctgttgcaatatacttgaagctgtagacaataagaaaagcaaagatggctcagtctta
gaagacaatttatgtagacttaatgttaagaaatcatcttgtatagatggctgtgaacta
gaaattttgagctgtgatccatgtaatggacttttgagtgccaaaagtgaacttcaagat
actgccaacatacaaaacattaaaaatgtaatgctatgcaatggatttgcacatggtagt
cataatggtttgtcatccagaatctcagatgatgttgattgcaaattgaatggccacatt
gacctggataagcttccgtcaagtcgtaaaggtgagagtgatagtgtaagtatagcaaag
gcagataccgaatgctgtgcctcagtacaaaaccagtttagcatggaaacttgttgtgat
tccattgctgaaacttccgcttctcttgctacctccaagctgccttgtgaggcagtttct
gctcttgctactcacgtcaatatcacaacaaattctcacaatgaaataatgattgaagaa
attggtgaccaagtggattcttcagatagtttagaagaaaattctacacctgaacagtca
aagataacaccaccaccaaaaacatgcacagaaagtgtagatagttgtccaggtaattct
aatactggtttgaattcaagtaatgaaatggaagaaactagctcaactgcaccagtggta
tcttcagaggcagctgcaatggctgacacactagcattgctgcttcctagtgggggcaag
gggcgtaaacgacgggatgacgttaaggagaaggtgaaagtccacaaccctgaagatcct
gactctgtgtgtggtctaatattcgttcatcaccgtaatatggccaagattatatacaga
ctcttaaaggagctcagtgatataggtggagattatgcctggatcttccctcagtacact
gttgaagcgaaagaaagtgtgaaggatgacccaagagctgccgaggctgagcataagaag
caggaggaagttctccgcagattccgtcatcatgagtgcaacgttttagtatctacgcgt
gttcttgaagaaggtatcgacgttccacagtgtaatcttgtcctacggtttgaccctcca
actgactaccgttcatatgtgcacagctgtggccgtgcaaggggtcatgacacattttat
tttcatttaatcaccaaaatgcaagagaaaagcttcctctgtgatatggcaacatattct
gcttttcaacaagtgttagtaagtcggtgcggaagtgttgaagtgggcacagatgtagaa
gttatggctgaggaagctaatggtgcatatccctcctacctaacccctgctaatactgct
gttaccatggcttcagcaataggccttctgaacaaatattgtgccaaactaccgagtgac
accttcacacgtttaacagctatgtgggaaatagaagagaatgaagacagtattggcagt
tactgttgcagaataatgttgccaattaactctcctttaaaaggaaccattcagggtcct
tggcaagaaaaggtgtccctagctaagatggctgctgctttggaatgctgccgcagcctt
catcagataggagaattggatgaccagttgcagcctgttgggaaggagagcatgaaactt
gatgaccatctttgtgcacctccagcagatgaccaagtgccagaaggaatgcctcgcccg
ggaacaaccaagagacgtcaatattactacaaaaaggtagcagaatgcttgacaggagag
cagccaaaagagaagctggatttgtttgtttacaagttagacatggtgctgacctgcccc
atacctgatgagcaaaacacacgtggccgtaagatctatcgtccagaaaagtccacacgt
tcgtttggtattgtcacaactaaacctatatcacaggttagcggttttccagtgttcact
cgctcaggtgaagtggttgtccatgtccgtgagactgggagaagggagcaatttacccag
gatcagctagcagctctgcagtgctttcataagtttacctttactcatgtgttgcgtctg
gagaaatatcctataaagtttgaccccacaaatgcaagaacagccttctacattgttcca
cttaacaaatttgaaggacgtgaagacattgactgggagtttgttacaaaaattcagcta
gaaggagatccaaggccagttcctccccttgatgatacaagaaagaaattccagtttcag
cattgcctatatgaagatgctgttgtaatgccctggtataggaatcaagaccagcctcag
tacttctatgtggctgaaatatgcactcatcttaacccacaaagtgacttcccagatgct
ggatttgagacttttgaaaaatattatttgactaaatatgggcttcaaatttgtaatttg
tctcagcctttgcttgatgttgaccatacatcaggccgtcttaacctgctcacaccaaga
catgttaacagaaaaggagttgctctgcccactacctcagaagagaccaagcgtgcaaaa
cgagaaaatctacaacaaaaacaaattttagtacctgagctgtgcacaatccatcccttc
ccagcatctctgtggcgtaaggctgtctgtttgcccactattttgtatcgtataaatgct
ctccttttggcagaccaattaagaatatgtgtggccagtgaagttggtcttggacttcag
atacttccttcagacttctcttggccacctttggattttggttggagccttgctgatgtg
ctgaagaagagtcaagataaccaaatacaggaggacagcactgaacataaaactgaaagt
gttacaaaacaaaaaggaaagataacagaatcgctgggtaatgaatcaccccctgtaaag
aaaaagatcagtaaaaatggtatcgatatggaaataggtacttggtccaatgatatggct
gttgatccccctactccaccctacagcatagatgatatgaatcctgcagatgattttgaa
attgatacatttgatcctaatgtggctttaccagataatctcacattactggatggtttt
actaatgttgatgatgatatagagggagaattaggtgctgactggggtactggcattaca
gaacgtaggtcgaaaaatggctgtcacaaggatagtagtggagaggttttccgagtaggt
tcaccatcaaactttgaaatcgatggttgggatgtgtttggtggacctggctcttctggt
tacggaggtggttacaatggttatggttcctatgatgcctatggaggttatggagatttt
cagggcttggcagatgatcttgaaggctgtgaatcagacgtttcttctgatatggacgat
gacgacaaaagccaagcagagaagatgtgggatgatgaagggagtaaaagaagaacaagt
atggccattgatgaaggttcttctgatgaagaaatagatttacagtggccctatgaagat
gacattgtcaaggcagagaaagaagaagaatttcatctatttctggaggagaaacagtgt
gcaatattagaaagctcttgttacttggctgagaatgcaccattggttatagagaaggca
cacagaaagctagcaaatgaaaataaaatgtcatcaccagagaaagtgagtttacctgtg
gacaaatttacattgcaaggctgtgaaccactatcttcaaaaggctgtgataatgctcaa
caaactacctcacctgccactaggattgtgaatcgtactgaaaccctttctctggttaaa
ctagataatggtgctgactctttctctggaaagagcaattctggtgaaacactcttcagt
tttgattaccagccagatctcataaaccatcctggcccacctcctagtataattcttcag
gcactcacaatgtctaatgcaaatgatggagtcaatctggagaggcttgagactatagga
gattcattcttgaaatatgctatcaccactttcttgtactgtacttatccacaacgtcat
gaaggcaagctcagttacctgcggtccaagcaagttagtaacctaaatttatatcgatta
ggtaagcgaaagggacttggagagtgcatggttgcaaccaagtttgagcctcatgacaat
tggctgcctcctggttattttgtgccacgtgagttagaagaagcattgattgattcagga
gttcctgccggtcactggaacatggctgacttaccaggacttcatgatctggccagtgat
gagataagacgattagttcaagaacgttcagaacaaataaaacgcagtaaaactgagcat
ataaccagtgaattaatggccacacagaatcctcatgatttacctatctttattccatac
aatttgctcacacaacatagtattcctgacaaaagtattgcagactgtgttgaggctctg
ataggtgcttaccttacaacttgtggtccccgtggtgctttacttttcatgtcttggctt
ggaatcaaggtcttaccatgtaagatagatgaggaatctgaaaatgtactgcatatcaca
tatggtcacttggagccacctcagtcacctcttcatcagtgttcagtaacagatacttac
atgcagttggaattgttacttagtggatatatggtatttgaggagaagattggatatacg
ttccgggaccgttcttatttgcttcaagcattcactcatgcttcatattacaagaaccgc
cttactgactgctaccagaggcttgaattcttgggagatgctgttcttgactatctgata
actcgtcacttgtatgaggataagagacagcattctccaggggctctcacagacctgcgc
tcagccttggttaataacacaatatttgcatctttggcagtcaaatatgactttcacaag
tacttccgccacttttcaccgggtttggaccgagtagtgagagactttgtcaagatgcaa
gaagagaatggccataaaatcaacgaagaatattacttcatggaggaagatgaatgtgag
gcagcagaagatattgaagttcccaaagctctgggggatgtatttgaaagtgtagctgga
gcaattttcttggactcgggcggttccttggatgctgtctggtctgtatactataccatg
atgtgccgagagattgaacagttcagtggtgtagtgcctaaatcgccaattcgtgaactt
ttggaaatggaaccagagacagctaagtttggcaagcctgaacgcctggttgatggtaag
gtcagggtttcggtggaaatatttggaaagggttcattctctggcgttggtcgcaattat
cgtatagcaaagtcaacagcagcaaaaagagctttaagacacctgaagaagcttcagatg
atgaccagtcaaggaatctaa
DBGET
integrated database retrieval system
