KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128701546
Entry
128701546         CDS       T09502                                 
Name
(RefSeq) DNA ligase 1-like isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03030  DNA replication
cqd03410  Base excision repair
cqd03420  Nucleotide excision repair
cqd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    128701546
   03410 Base excision repair
    128701546
   03420 Nucleotide excision repair
    128701546
   03430 Mismatch repair
    128701546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cqd03032]
    128701546
   03400 DNA repair and recombination proteins [BR:cqd03400]
    128701546
Enzymes [BR:cqd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     128701546
    6.5.1.6  DNA ligase (ATP or NAD+)
     128701546
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     128701546
DNA replication proteins [BR:cqd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    128701546
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     128701546
DNA repair and recombination proteins [BR:cqd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     128701546
   NER (nucleotide excision repair)
    Other NER factors
     128701546
   MMR (mismatch excision repair)
    Other MMR factors
     128701546
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 128701546
NCBI-ProteinID: XP_053651259
EnsemblRapid: LOC128701546
LinkDB
Position
76:complement(21134763..21165014)
AA seq 1269 aa
MAPPGTSSSGSFFSAPKAKKEELSSEGSSQGTSNETMTSKKGKESLTKKVPHKVRVIESD
SEEEAAEEEVASISSPHKSDEEKENKTKRPQNALSKGKEKIAKGKNGKKSVGRPQMKKDT
TPEQKTDKEDIKKSKRNQTTKKSITKVPKERKSQKDCPPSKKRKSTGTDENEEGNREEKM
KTDAGGDGEEDLEADSNDDDTFVAEKDSEVESLNETLETEDVDGDSADDKVRESNKDHLT
KKDGNKVKIEDKLAKFKKTCENIKETTPEKSENKDEEDGDDEKADKKTCKGKKDLTPKKD
KSRDKEDGDKDAKIDKEAPEGKEGHKTGKGENKEKEAKTKTSFGETNLASPNKSSTLSQR
SSPGFTPDTVPPIRKTARKQLKRKSDSLESKQMSIIKKLKGEDDGDIASKTSNEDDIKPK
DEDVESVKDEEREMTDDADSLESEEKCLVKEDEDGVRSETVMMGSLKNEVKKEKTEDKEE
PMEVDSNDSKNEDQSSASSRPKPMAIHSFFSPRSTATPKKSATYTKNSPKGKKVSPSKES
SNLLKKAGPSSASSPSKNRIDENTSEEEHDSSPQKRDRSHKNESPLKSNSSEKSEKKNII
NPFAPKISGTGDVGASYNPGKSKYHPIKDAFWSRLEKVPYLALAKTMEIIENTSGRLKTI
EILANFFRSVIILTPDDLLLCVYLCLNKVAPSFEGIELGIGETILMRAIAQASGRTVEKI
KQDAEQKGDLGIVAEHSRSNQRIMFQPAKLTVRGVFDKLKEIALMTGNASQNKKIDKIKG
MFVACRFSEARYLIRSLGGKLRIGLAEQSVLQAVAQACFLTPPGQEYPPEVIDAGEGISA
DKLKAKIDNYGLILKTTYCEFPSYDKIIPVILSEGLEELPNHCRLTPGIPLKPMLAHPTS
GVSEVLKRFEKAKFTCEFKYDGERAQIHLKEDGTINIYSRNQEDNTSKYPDIIARLKSAV
GDEVKSCVIDSEAVAWDREKKQILPFQVLSTRKRKDVNESDIKVQVCLFPFDLLYLNGEA
LVREPFERRRALLRENFKEVEGEFVFAKSMDSTNTEDIEEFLEESIKGNCEGLMVKTLEV
DATYEIAKRSHNWLKLKKDYLDGVGDTIDVVVIGGYMGRGKRGGHYGGFLLACYDPDNEE
YQTLCKIGTGFSDEDLLTHSTFFKCHVIEKPKSYYRYDNSIAPDNWFEPVQVWEIKCADL
SISPVHKAAAGVVDPERGISLRFPRFLRIREDKTPEDATSSAQIADLYNSQEQIKNKKTS
GKAVEEDFY
NT seq 3810 nt   +upstreamnt  +downstreamnt
atggcgcctccgggaacctctagttctggatcgttcttctcggctccgaaggcaaaaaag
gaggagctttcatctgagggaagttcacaaggaacaagcaatgaaacgatgacttcgaag
aagggcaaagagtcacttaccaagaaagtgccacataaagtacgagtaattgagagtgac
agtgaagaggaggcagcagaggaggaagttgcttctataagttctccacacaagtccgat
gaggagaaggaaaacaagacaaaaagaccacaaaatgctctgagtaaggggaaggaaaaa
attgccaagggtaagaatggaaagaagtctgttggcaggccacagatgaaaaaagatact
accccagaacagaagactgataaagaagatataaaaaaatctaaaaggaatcaaaccaca
aaaaaatcaataacaaaagtgcccaaggaaagaaaatcccaaaaagattgtccaccatcg
aaaaaaaggaaaagtaccggcacagatgaaaatgaggaaggtaacagagaggaaaaaatg
aagacagacgcaggtggagatggggaagaagaccttgaggcagattccaatgatgatgat
acatttgttgcagaaaaggattcagaagtagaaagtcttaatgaaacattggagacagaa
gatgtagatggagattcagcagatgataaggtacgtgaaagtaataaagaccacttgaca
aaaaaagatgggaataaggttaagatagaagataaacttgcaaaatttaagaaaacatgt
gaaaatataaaagagactacaccagagaagagtgaaaataaagatgaggaagatggggat
gatgaaaaggctgataagaagacgtgtaaaggtaaaaaagatcttacaccaaaaaaagat
aaaagcagggataaggaagatggcgataaagatgcaaagattgataaggaagcacctgaa
ggtaaagaaggtcataaaacagggaaaggtgaaaataaagagaaggaagctaaaacaaaa
acaagtttcggagaaacgaacctcgcatccccaaataaatcatcgaccttgtcacagaga
agttcacctggctttacacctgacactgtcccacctataagaaagactgctcgtaagcaa
ttgaaacgtaaaagtgacagccttgaaagcaagcaaatgagtataataaagaagttaaaa
ggggaagatgatggtgacattgcatcaaagaccagtaatgaagatgatattaaaccaaaa
gatgaagatgtggagagtgtgaaggatgaagagagagaaatgacagatgatgctgacagc
cttgaaagtgaggaaaaatgtttggtgaaggaagatgaagatggtgtcagatcagaaaca
gtaatgatggggagtttgaagaatgaagtaaaaaaggagaagacagaagataaagaggag
ccaatggaggttgacagtaatgacagcaagaatgaagaccaaagttcagcctccagcaga
cccaagccaatggctatacacagctttttctctcccagatcaacagcaactccaaagaaa
tctgccacatataccaaaaactctccaaagggaaagaaggtgtctccatccaaggaatct
tctaatttgcttaagaaagctgggccaagtagtgcatcttcaccctcaaagaaccgtata
gacgaaaacacatcagaagaggaacacgattcctctccacagaagagagatcgatcccac
aagaatgagtcgcccctaaagagcaattcttcagagaagtctgagaaaaaaaatatcata
aatccctttgctcctaaaatttctggcactggtgatgtgggtgccagctataacccaggc
aagagtaaatatcacccaatcaaagatgctttctggagcagactagaaaaagtcccatat
cttgctttagcgaagacgatggagattatagagaacaccagtgggagacttaagaccatt
gagattctggccaatttctttcgttcggtgataatcttaactcccgatgatctcttgctg
tgtgtgtacctgtgtctcaacaaagttgccccatcatttgaaggtattgagttgggcata
ggagaaacgatattaatgcgtgccatagctcaggcatcaggaagaactgtggaaaagatc
aaacaagatgctgaacagaagggagacttaggaattgtagccgagcattcgagatccaac
cagaggataatgttccagcccgccaagctcactgtccgaggggtgttcgacaaactgaag
gagattgctctcatgactggcaatgcttcacaaaataagaaaatagataagataaaagga
atgtttgtagcttgtcggttttccgaagcacgatacctcattcgttccctgggtgggaag
ttgcgtattggtctggctgagcagtcagtgcttcaggctgtagctcaggcttgcttcctc
accccgccaggccaggagtatcccccagaggttattgatgctggtgagggcatttctgct
gataagttgaaggcaaagattgacaactatgggttgattctaaagacaacctattgtgag
tttccttcatatgataaaatcattccggtgattctaagcgaaggcctcgaggagctccct
aaccactgtcgcttgacaccaggcatcccactgaagcccatgttagcgcaccctacctca
ggggtgtcggaagttttgaaacgctttgaaaaggccaagttcacatgcgaattcaagtat
gatggagaaagggctcagatccatttaaaggaggatggtactataaatatttacagcagg
aaccaggaagacaacaccagcaagtatcctgacattattgcccgcctcaagagtgcagtt
ggagatgaagtaaaatcttgtgtgattgactcagaagctgtagcttgggaccgggagaaa
aaacagatccttcccttccaagttctaagcactcgaaaaagaaaagatgttaatgaaagt
gacatcaaggtacaagtttgtctgtttccttttgacttactctacctgaatggcgaagct
ctagtgcgtgaaccttttgagcgtcgtagagctcttttacgtgaaaacttcaaggaagtt
gaaggagagtttgtgtttgccaaaagcatggattcaaccaacactgaagacatagaagaa
ttcctggaggaatctattaaaggaaactgtgaaggtctcatggtgaagaccctggaggtg
gatgccacgtatgagatcgcaaaacgctcgcataactggctcaagctgaaaaaggactac
cttgatggggtgggagatacaatagatgttgtagtgattggtggctacatgggaagaggc
aaacgcggaggccattatggcggcttcctcttagcttgttatgacccagataatgaggaa
tatcagacactttgtaagattgggactggtttctcggatgaagatttgctgactcattct
actttcttcaaatgtcatgttatagagaaaccaaagtcttactatagatacgacaatagc
atcgctccagacaattggtttgaacctgtgcaagtgtgggagataaagtgtgctgacctc
tccatatcgccagtacacaaggctgccgcaggggttgttgatccagaaaggggcatctct
cttagattccccagatttttacgtattagggaagacaagacaccagaggatgctacaagt
tcagcccagattgctgatctttataatagccaagaacagataaagaataaaaagacttca
ggaaaagcagttgaagaagacttttattaa

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