Cherax quadricarinatus (Australian red claw crayfish): 128701552
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Entry
128701552 CDS
T09502
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03022
Basal transcription factors
cqd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128701552
09124 Replication and repair
03420 Nucleotide excision repair
128701552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128701552
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128701552
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128701552
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128701552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
128701552
NCBI-ProteinID:
XP_053651269
EnsemblRapid:
LOC128701552
LinkDB
All DBs
Position
76:21313449..21334955
Genome browser
AA seq
533 aa
AA seq
DB search
MLAFSTQTLTCKNLQEYLRSLPKDTLDRLYRHPATCLAVFRELPELSRQFILRLLFVTKP
ISQVLLATWIPQHEPGRDLGDIASEHRQGTQVLLDMYIWQEVKDHQGNMAIKLNNTFREN
LKVAVLGGGKPWTMSAALDPDPHQRDIEFLDKYAMDRWESVLQFLVQPGQGQTAISRDAM
LTLLHAGLIESSDESDNMQITSSGFQFLLLDTASQVWFFILKYLETVTERGLSLVSCLTF
LFKLSFSTLGKDYSMEGMDNELLTFLQHLREFGLVYLRKRISGRFYPTRLALNITAGQNK
GTIDAHKHGYLVIETNYRIYAYTVSELQIALLSIFSDIEGRFPNMVVASISRSSVRRALL
KGIGAEQITSFLRQHCHPQMFKNSPVVPRTVADQIKLWELERERLEFSEGVLYKDFMSVH
DFSLLSNFASSKGVLIYSDEKQRTMVVTKKGHPAIKLFWKEAQTNHKENADLCHTVLGEW
DNVSFFQRENNSNSLGQEPFTINKYRFDIIFTLSHYEPFIIFAYVTSVNVPLP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccttcagtactcagacattaacttgtaagaacctacaggagtacttgaggtcc
ttacctaaggacacgctagacaggctctacagacaccccgccacctgcctcgctgtcttc
agggaacttccagaattgagccgacagttcattctgaggctcttgttcgtgaccaaaccc
atctcacaagttttgttagccacatggatcccccagcacgagccaggcagagacctcgga
gacattgcttcagagcaccggcagggcacacaggtcctgcttgacatgtatatatggcag
gaagtgaaggaccaccagggtaatatggccatcaaactcaacaacacttttagagagaat
cttaaagtggctgtgcttggaggtggaaaaccatggactatgtctgctgctttagaccca
gatccacatcaacgagacatcgagtttctagacaaatatgcaatggatagatgggaaagt
gttttgcagttcctggtgcagcctgggcagggccagacagccatctcccgagatgccatg
ctcacactccttcatgcaggccttattgaaagcagtgatgagtcggacaacatgcagata
accagctcaggttttcagtttctcctccttgacacggcttcacaagtttggttcttcatc
ctgaaatatttagagaccgtgacagagcgtggcctcagccttgtgtcatgtctcacattc
ctttttaagctgtcattctcaactctaggtaaggattacagcatggagggaatggataat
gagcttcttactttcctccaacatcttcgggaatttggtcttgtgtacctgcgcaaacga
atttctggcaggttttatcccactagattagcactgaacatcactgctggccaaaataag
ggcaccatcgatgcccacaaacatggttatctggtgattgaaacaaattatcggatatat
gcctacactgtttctgagctccagattgcacttctttctattttctcagatatagagggc
agatttcccaacatggtggttgcaagtatctctcgtagcagtgtgcgtcgggcactcttg
aagggtattggtgctgaacagattacaagtttcctgcggcagcattgtcacccccagatg
ttcaagaacagtccagtggttccacgcactgtggctgaccagattaaactgtgggagctg
gaaagagagcgtttggagttcagtgaaggtgtcctctacaaggattttatgtctgttcat
gacttctccctcttatctaactttgcatccagcaaaggtgttcttatatactctgatgag
aagcagaggactatggtagtaacaaagaagggacatcctgccattaagcttttctggaaa
gaagcacaaacaaaccataaagaaaatgcagatctgtgtcatacagtgctaggggaatgg
gacaatgtcagtttttttcaaagagagaacaactcaaattccctgggccaagaacccttc
accatcaacaagtacaggtttgatattatttttactttatcacattatgaaccctttatt
atttttgcatatgtcacaagtgtaaatgtccctctcccttga
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