Cherax quadricarinatus (Australian red claw crayfish): 128701969
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Entry
128701969 CDS
T09502
Name
(RefSeq) regulator of nonsense transcripts 3B-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
cqd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128701969
03015 mRNA surveillance pathway
128701969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128701969
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128701969
mRNA cycle factors
P-body specific factors
128701969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
128701969
NCBI-ProteinID:
XP_053651935
EnsemblRapid:
LOC128701969
LinkDB
All DBs
Position
79:complement(4919620..4943208)
Genome browser
AA seq
663 aa
AA seq
DB search
MTVKTTETPRREGSKSYVEGSLKRTSENTSSSRHNVKTKKEKTASPLTKVVVRRLPPNMT
EEEFREAVSPLPEHDYFTFSPADNSLGPYSFTRAYINFKNVDDVFTFRDKFDGYVFVDQK
GNEHPAMVEFAPFQKIPKRTNGKKRDARCGTIDQDPDFLAFLESITNPVAVTLPPLEAVL
EEIQAQDRELKANNGIIKVKTPLLEFIEQKKAEKLRSKEEKKEERRRKEFERKKAREEDK
RKKKDGKDVRDIKKKEDLKDDNSVKVLRPERTKEDYLAEARLSRKEREKERYEKERLRRI
EEDRLKREREKGRLIKKEKEREDRLRRHEEKTKVKEEERIKQREEVKEEWQEERVQVSKS
EGVKSKRYSEGRRKEEREREKRIKEEKDKEKKSKDEHEKEPTPKDEKESVSEALTGATEP
MEMSETIETQQENAEERNVKEETNQEEPAKEPQESEKHSEEKSCARKKREKDPRVERRIR
NKDRPAMALYRPGQSRLSSRMRQDREEGAETSSSSPSPVMPPGDPKKYQSQTKKENSDTQ
KETLNSKEGSVDSRSDSLDLDPECPKDKDVRGREDHVGTKTLRESRVKSNEACSERYYSK
FRDGRNKGHHTGRKRETEDDIEVRDGAHGEQSSDVADNADTAADMKKFPGVKTMTFRRSV
SRE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaagacaacggagacaccgaggagagaaggttctaagagctacgtggaaggt
tcacttaagagaacctcagagaacaccagcagcagcagacacaatgttaagaccaagaaa
gagaagactgcttcacctctcactaaggtggtggtacgacgtcttcctcctaacatgaca
gaagaggaattccgcgaagccgtctctcctctgccagaacatgactactttaccttctct
ccagctgacaacagtcttggcccctactcttttactcgagcatacattaacttcaagaat
gtggatgatgtcttcacattcagagacaagtttgatggctatgtttttgttgatcagaaa
ggaaatgagcatcctgccatggtagaatttgctccttttcaaaagataccaaagcgcact
aatgggaaaaagagagatgccagatgtgggaccatagatcaggacccagatttcctggcc
tttcttgagtccatcaccaaccctgtagctgtgacacttcctcctctcgaggctgtgctt
gaggagatccaagctcaagatagggagctcaaggcaaacaatggaattatcaaagtcaag
acgccacttctggagtttattgaacagaaaaaggctgagaaactacgaagtaaggaagag
aaaaaggaggagagaagaaggaaggaatttgaaagaaaaaaagcaagggaagaggataaa
agaaaaaagaaagatgggaaagatgtccgagacataaagaagaaggaagatctcaaggat
gataattcggtaaaggttttacgacctgaaagaacaaaggaggactacctagcagaagcc
aggctttcaagaaaggagagggagaaagaaaggtatgaaaaagagcggctaagaagaata
gaagaagataggctgaagagagagcgagaaaagggaagactaataaagaaggaaaaggaa
agagaggacaggctaagaagacatgaagaaaagaccaaagtgaaggaggaagagagaatt
aaacagagagaggaggtgaaggaagagtggcaagaagagagagtgcaagtaagcaagtct
gagggagtcaaatcaaagcgttacagtgagggacgcaggaaggaggaacgagaaagggag
aagaggataaaagaagaaaaagataaagaaaagaagagcaaagatgaacatgagaaggaa
ccaacacccaaggatgagaaagaatcagtaagtgaagcacttactggagcaactgagcca
atggaaatgtcagagacaattgagactcagcaagaaaatgctgaggagaggaatgtcaag
gaggagaccaaccaagaagaacctgcaaaggaaccacaagagagcgagaagcattctgag
gagaaatcgtgtgcacgcaagaagagagagaaggatccacgcgttgaaagaaggataaga
aataaggatcgtccagcaatggccctctacagacctggtcaatctcggcttagtagccgg
atgcgtcaggaccgcgaggaaggagcagaaacgtcgtcatctagtccaagtcctgtcatg
cctcctggggaccccaagaaataccagtcacagaccaaaaaggaaaactcagatacccaa
aaggagactttgaactccaaagaaggatctgtagactccagaagtgactctctggatctg
gatcctgaatgtcctaaagacaaggatgtgaggggtagggaggaccacgttggcaccaag
acattaagggagagtagggtgaagagcaatgaagcttgtagtgagaggtactatagtaaa
ttcagggacggaaggaacaaaggccatcacacgggacgcaagcgagagacggaggatgac
atagaggtgcgtgatggagcccatggagagcagagctctgatgtggcagacaatgcagat
actgctgcagatatgaagaaattcccaggagtaaagaccatgactttcagaaggagtgtt
agtcgagagtag
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