Cherax quadricarinatus (Australian red claw crayfish): 128706325
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Entry
128706325 CDS
T09502
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128706325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqd03041
]
128706325
Enzymes [BR:
cqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128706325
Spliceosome [BR:
cqd03041
]
Complex A
U2 snRNP components
U2 related factors
128706325
Complex B
128706325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
128706325
NCBI-ProteinID:
XP_053657253
EnsemblRapid:
LOC128706325
LinkDB
All DBs
Position
6:52416343..52488834
Genome browser
AA seq
1045 aa
AA seq
DB search
MSRDNRRRRSRSRSRSPDRRRSRSRDRDRDRDRDRGRSRRSRSRDRHRSRSRDRRRSRSR
DRRSRSRDRSRSRERERDRRSRSRDRDRKRSRSRSRDRDRKRSKRSKSHSPAKVKPVLHP
PKPQEPTPAEPKDEEETGLDFDPSKVDKEEAEKRLEAEMQKRRERIEKWRAEKKKRELEA
TKKEAEKGTLGANVPKVSIKAWSLEDDEEEEEVENKEGDGKLEEEDEVDPLDAFMSGIQE
EVRKINRVDIRGGVRRGVKTNVFGNETGGMKKPVIIMGMAKKVNAKKKGELMEQNQDALE
YSSEEEGEDLKDTMASINSKGKKELVKVDHTTIDYVPFRKDFYVEVPEIANMTKEEVDAY
RAELEGIKVKGQGCPKPIKTWAQCGVSKRILDVLKKSNYEKPTPIQVQAIPAIMKGRDVI
GIAKTGSGKTLAFLLPMFRHIVDQPPLEDTDGPTAIIMTPTRELCMQIGKECKKFAKNNL
RVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLRRVTYVVLDEADRM
FDLGFEPQVMRIIENIQPARQTVMFSATFPRQVEALAKKILTKPIEIMVGGRSVVCRDVT
QEVVLLDEDQKFLKLLEILGQFYERGQTIIFVDKQENADSLFKDLLSHSYRALVLHGGVD
QIDRDSTILDFKAGRVPIMVATSVAARGLDVKQLILVVNFDCPNHYEDYVHRCGRTGRAG
NKGYAYTFLTRDQPRYAGEIIRAMELSETPVPADLQKFYDEYKQKMEGEGKKVKTGGGFH
GKGYKFDESEANFASEKKKFEKAALGLADSDDEDIEQDIDQQIESMLNTKRTVKEIKVTT
EVSSSQGDGLSGMPLGGPSASDKLELARKLAQRINLQHNIGKEAKGASQQAAEFILKGGA
AMQPTISAKTVAEQMAQKLNNKLNYQPRDDQEEEEEAAEETHHKYEEELEINDFPQQARW
RVTSKEALAQISEYSEAGITVRGTFCPAGKNPPEGERKLFLAIESTSELAVSKAKAEIIR
LIREELVKLRTSAGPVKAQGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagataacaggcgcaggagatctcgaagccgttctcggagtccagaccgcaga
aggtcaagatcccgagacagggatagggacagagacagggatcgaggtagatcacggcga
tcccgatccagagaccgccacaggtcgcgcagtagagatcggagacggtcaagatctcgt
gacagacgttcaagatcgagagacagatctaggtcacgtgaaagagaaagggataggagg
tcaagatctcgtgacagagacaggaagaggagtaggagcaggtcaagagacagagatagg
aagaggagcaagagaagcaagtcacactctccagccaaggtcaagccagttttacatcct
ccaaagcctcaagagccaacacctgcagaacctaaggatgaggaggagacagggcttgac
tttgacccttctaaagtagataaggaggaggctgaaaagcgtcttgaagctgaaatgcag
aagaggagggaacgcattgaaaagtggagagcagagaagaagaaacgggaattggaagca
acaaagaaagaagcagaaaagggtactttaggagctaatgtgcccaaagtatcaataaaa
gcctggagtctagaagatgatgaggaagaggaggaggttgagaataaagaaggtgatgga
aaactagaagaggaagatgaagttgatcctcttgatgcatttatgtctggcattcaggaa
gaagtgcgaaaaattaatcgtgtagatattaggggtggtgtaagacgtggagtcaaaaca
aacgtatttggaaatgaaactggtggaatgaagaagccagttattattatgggtatggct
aagaaagttaatgccaaaaagaaaggagagctgatggagcaaaatcaagatgcattagaa
tattcatctgaagaagagggagaagatctaaaagacaccatggcaagcataaattctaaa
ggaaaaaaggagttggtgaaggttgaccatactaccatagattatgtaccattcagaaag
gacttttatgtggaagtgcccgagattgctaacatgacaaaggaggaagttgatgcatac
agggcggagttggagggcatcaaggtcaagggtcagggatgtccaaagccaattaaaacc
tgggcccaatgtggagtcagcaagaggatcttagatgtgttgaagaagagtaattacgag
aaaccaacaccaattcaagtacaagctattccagccatcatgaaaggtagggacgtcata
gggattgccaagactggatcaggaaagacactggcatttcttctcccaatgtttcggcat
attgtggatcagccgccactggaggatacagatggtcctactgccatcattatgactccc
actcgtgaactctgcatgcagattggtaaagagtgcaagaaatttgccaaaaacaacttg
agagtatgctgtgtctatggtggtacaggaatatcagagcaaattgctgaacttaaacgt
ggtgcagaaattattgtgtgtactcctggacgaatgattgacatgttagctgctaatggt
ggacgagtcactaatctccgcagagtcacatatgttgtgctagatgaagcagatcgtatg
tttgacttgggatttgagccgcaggttatgagaataatagaaaatattcaacctgctcgt
cagacagtcatgttctcagctacgttcccgcgacaagtagaagcactagccaaaaaaata
cttactaaaccaattgaaataatggttgggggaagatctgttgtgtgcagagatgtgaca
caggaggttgtacttcttgatgaagaccagaaattccttaagctgttggagatccttgga
caattttatgagcgtggtcagaccatcatctttgttgacaaacaggagaatgctgactca
ttattcaaggacttgctgagccactcttatcgggctctagtgctgcatggtggtgttgac
caaatagatcgagatagtacaatcttagattttaaagctggaagagtacctatcatggtg
gctacttctgttgcagctcgaggtcttgatgtcaaacagcttattttggtggtcaacttt
gactgtcccaatcattatgaggattatgttcataggtgtggccgcactggtcgtgctgga
aacaaaggctatgcctatacgttcctaactcgtgatcagcctcgttatgcaggtgaaatt
attcgtgccatggaattatcagaaacacctgtgcctgcagaccttcaaaaattttatgat
gaatataagcagaaaatggagggagagggcaaaaaagttaagacaggtggaggctttcat
ggtaaaggctacaaatttgatgagtcagaggcaaactttgcctctgagaaaaagaaattt
gaaaaagctgctttgggtctggcagactctgatgacgaagacattgagcaggatattgat
caacagattgagagtatgctaaacactaagaggacagtcaaggagattaaggtgactact
gaggtatcttcatcacaaggggatggattatcaggaatgcctcttggtggtccttctgct
tctgataagttggaactggcccgtaaattggctcagcgcatcaatcttcagcacaatata
ggcaaagaggccaagggtgccagtcagcaagcagcagagtttattcttaagggtggagca
gctatgcaacccaccatatctgccaaaacagttgcagaacagatggcacagaagttgaat
aataagttgaattatcagccacgtgatgatcaagaggaggaggaagaagctgcagaggag
actcatcacaagtatgaggaagagcttgagatcaacgacttcccacagcaggcaaggtgg
cgtgtaactagtaaggaagctctggcccaaatctctgaatattctgaggctggaataaca
gtcagagggacattctgtcctgcgggtaaaaatccacccgaaggggagcgcaaactcttc
ttagctattgaatctacttctgagttagcagtgtccaaagccaaggctgagatcattcga
ttaatacgtgaagaactcgtgaaactgagaaccagcgcaggtcctgtcaaggctcagggc
agatacaaggttctttag
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integrated database retrieval system
