Chenopodium quinoa (quinoa): 110682777
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Entry
110682777 CDS
T05764
Name
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110682777
03015 mRNA surveillance pathway
110682777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110682777
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110682777
mRNA cycle factors
P-body specific factors
110682777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
110682777
NCBI-ProteinID:
XP_021714802
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MKEPLNRTKVVVRHLPPSLSQSSFFEQIDGRFSSRYNWSSFCPGKSSHKNQRYARAYLNF
NSHDDVCEFAEFFNGHVFVNEKGTQYKAIVEYAPSQRVAKPNAKKDGREGTIYKDPEYVE
FLEQISKPVENLPSADIQLERREAERAGVQEAPIITPLMEYVRKRRAAKGGNQRLGSDGK
SRGRSALASGKSRSSKQNSYVLKNNGKGTNGKDKSACVLVSQRNNEVDASSKKGVAENET
GSGSHETTKKRILLLKGKEQEIHQASEGTTLPKVVVSDSSSPSVGLKLNQRPDASGRIIR
SILLNKELRPSQSSSSVQTEHKLQGSNLERSKRPPRPSNMKSGVLASTGEQSPSGLDYMG
KRSNEDKPSGGEPHGSAVGREKQDRRTRSRERLDRGVWTPRRPDSSQISNENQSNISDSY
EAKRGDSKYDASGRNVEGIITAGGRNSSYAENGSHRNFARRGPTHAKDDGPSKRGGGVGH
AHHEKQVWVQKSASGS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagccattgaatcgaaccaaagttgtggtaaggcacttgcccccttctctttca
cagtcgtcctttttcgagcaaatcgatggccgtttctcttctcgttacaattggtcctct
ttttgccctggaaagtctagtcacaagaatcagaggtatgctcgggcgtatctgaatttc
aacagtcatgatgatgtttgtgagtttgctgagttctttaacggccatgtttttgtcaac
gaaaagggaactcaatataaagctatagtggaatatgctccttctcaacgtgttgcaaag
cctaatgccaagaaagatggccgggaagggacaatttacaaagatccagagtatgtggag
ttccttgagcagatttcaaaacctgttgagaatcttcctagtgctgatatacagctggaa
agaagagaagctgaacgagctggtgtacaagaagcacctatcatcacaccgctgatggaa
tatgtgcgaaaaaggagagctgcgaagggtggcaatcagcgtctagggtcagatggcaag
agtcgtggacggtctgcattggcttcagggaagtctcgatccagcaagcaaaactcgtat
gtcttaaaaaataatgggaagggaacaaatggaaaagacaaatcagcatgtgttcttgtg
tctcagagaaataacgaagtggatgcttccagcaaaaaaggagtagcagagaatgaaaca
ggaagtggttctcatgagactacaaagaaaaggattctgcttttgaaagggaaagagcaa
gagattcatcaggcatctgaaggtactaccctgcccaaggttgtcgtctctgattcttca
tcgccttcagttggtttgaaattaaatcaaaggcctgatgctagtggaagaattattaga
agcatattattaaacaaggaacttcgtccaagtcagtcatcctcatcggtccagacagag
cacaaacttcagggctcaaatttagagaggagcaagcgtccaccacgaccatccaatatg
aaatcaggagtgctagcgtccactggtgaacagtctccttcgggtttggattatatggga
aagaggtctaatgaggataaaccttcaggaggtgaaccccatggttcagctgttggccgt
gaaaagcaagatagacgtacaagaagtagggaaagacttgatcgtggtgtctggacacct
cgccgtcctgattcttctcagattagcaatgagaatcaaagtaatatttcagattcttat
gaagctaaacgcggagactcgaaatatgatgcatctggccgtaatgttgaaggcataatc
actgctggtggtcgcaacagctcatatgcagaaaatggctcccataggaattttgctcgt
cgtggtccaacacacgctaaggatgatgggccatccaaacgcggaggaggagttggccat
gctcatcatgagaaacaagtgtgggtccagaagtcagcctcaggttcctaa
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