Chenopodium quinoa (quinoa): 110694954
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Entry
110694954 CDS
T05764
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110694954
09122 Translation
03013 Nucleocytoplasmic transport
110694954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110694954
03041 Spliceosome [BR:
cqi03041
]
110694954
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110694954
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110694954
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110694954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
110694954
NCBI-ProteinID:
XP_021727833
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSGRNYENEPFLLGTRGDGPAQEIFRKALLNPELPEKFALQTVQEAIKPQRQTKLVLDEN
QLLENILRTLLQELVACAVQSGEPTMHYGRSIADGDLAQGQIPRLLDIVLYLCEKEHVEG
GMIFQLLEDLTEMSTMKNCKDIFTYIESKQDLLGKQELFARGKLVMLRTCNQLLRRLSKA
NDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKEAPNGISIDFNFYKTFWSL
QEYFCNPPSLTVNPTKWHRFTSSLSVVLNTFEAQPLSDEEGNANNLEEEGAAVNIKYLTS
SKLMGLELKDPSFRRHVLVQCLILFDYVKPSGKSDKDLPSEAMKEEIKTYEERVKNLLEV
TPPKGKEFLCSIEHILEREKNWVWWKRDGCPPFEKQPMEKKVDGTKKRRPRWRLGNKELS
QLWKWADQNPNALTDPERVKTPAVTDYWKPMADDMDPSAGIEAEYHHKNNKVYCWKGLRF
SARQDLEGFSRFTEFGIEGVVPLELMPPEVRSKYQAKPNDKSKRVKKDETKGSVPPSEEN
QAINSVSEMDGEGGHNDLDAPAAAMDLDSTPITGQAGTPTPDDFQKQSSESPDAQEAGEL
DAEGDPEPGLIDGETDADVELEAVG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacgaaactatgagaatgaaccctttctccttgggaccaggggggatgggcct
gctcaggagatttttaggaaagccttgttaaatcccgagctgcccgaaaaatttgccctt
caaactgttcaggaagccattaaaccccagaggcaaacaaagttagttctggatgaaaat
cagctgctagaaaacattctacggacattactccaagagttggtggcttgtgcagtacag
tcaggagagccaaccatgcactatggccgttccattgctgacggagatcttgcacagggt
caaattcctcgccttcttgatattgtattgtatctctgtgagaaggaacatgtggagggt
ggcatgatatttcagctgttggaagatttgactgaaatgtcaaccatgaagaattgcaaa
gatatttttacttacatagagagcaagcaagacttacttggaaagcaagaactgtttgct
cgtggcaaacttgtgatgctgaggacatgtaatcaactgcttcgtcgtttgtcaaaggca
aatgatgttgtattttgtggacggattcttatgtttctggcacattttttcccgctgtct
gagcgctcagctgtgaatattaagggagtcttcaatacatccaatgaaacaaagtatgag
aaagaagctccaaatggcatttctattgatttcaacttctacaagacattctggagtttg
caggagtacttctgtaatcctccatccttgaccgttaatcctacaaagtggcacagattt
acatcaagcttatcggttgttctaaatacctttgaggctcaacccttaagtgatgaggag
ggaaatgctaataatcttgaagaagagggggcagctgtcaatattaaatatctgaccagt
agtaaactgatgggtttggagctgaaagatcctagtttccggcgtcatgttcttgtacaa
tgtttgatattgtttgactatgtcaagccctctggaaagagtgacaaagatttaccatca
gaggcaatgaaagaagaaataaagacttatgaggagcgtgtaaagaatcttctcgaagtg
acacctcctaaagggaaagagtttctctgtagcattgagcatattctagaacgtgaaaaa
aattgggtttggtggaagcgtgatggttgcccgccatttgaaaaacaacccatggagaag
aaggtagatggtacaaaaaaacgtcgaccaaggtggagattagggaacaaagaactttct
cagctgtggaaatgggctgatcagaatccgaatgctctcactgatccagagcgagttaag
actcccgctgtcacagattactggaaaccaatggctgatgatatggatccgtctgctggt
atagaagctgagtaccatcacaaaaacaataaggtttattgttggaaaggtctccgtttt
tctgcgcgacaggacttggaaggcttttctaggttcactgaatttggcattgaaggggtt
gtgcccctggaacttatgcctcctgaagtaaggtccaagtatcaggcaaagccaaatgac
aagtctaaacgtgtgaagaaggatgaaactaagggttctgtacctccatctgaagaaaat
caggctataaactctgtaagtgagatggatggcgaaggtggccataatgatcttgatgcc
ccagcagctgcaatggacctggattcaacacctattactggtcaagctggcaccccgaca
ccagatgactttcaaaagcaaagttctgaatccccagatgcacaagaagctggagaactt
gacgctgaaggtgatcctgagccggggttaattgatggagagacagatgcagatgttgaa
ctagaggcagtaggttga
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