KEGG   Chenopodium quinoa (quinoa): 110694954
Entry
110694954         CDS       T05764                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03013  Nucleocytoplasmic transport
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110694954
  09122 Translation
   03013 Nucleocytoplasmic transport
    110694954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110694954
   03041 Spliceosome [BR:cqi03041]
    110694954
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110694954
Spliceosome [BR:cqi03041]
 Complex C
  Other components
   EJC/TREX
    110694954
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110694954
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 110694954
NCBI-ProteinID: XP_021727833
LinkDB
Position
Unknown
AA seq 625 aa
MSGRNYENEPFLLGTRGDGPAQEIFRKALLNPELPEKFALQTVQEAIKPQRQTKLVLDEN
QLLENILRTLLQELVACAVQSGEPTMHYGRSIADGDLAQGQIPRLLDIVLYLCEKEHVEG
GMIFQLLEDLTEMSTMKNCKDIFTYIESKQDLLGKQELFARGKLVMLRTCNQLLRRLSKA
NDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKEAPNGISIDFNFYKTFWSL
QEYFCNPPSLTVNPTKWHRFTSSLSVVLNTFEAQPLSDEEGNANNLEEEGAAVNIKYLTS
SKLMGLELKDPSFRRHVLVQCLILFDYVKPSGKSDKDLPSEAMKEEIKTYEERVKNLLEV
TPPKGKEFLCSIEHILEREKNWVWWKRDGCPPFEKQPMEKKVDGTKKRRPRWRLGNKELS
QLWKWADQNPNALTDPERVKTPAVTDYWKPMADDMDPSAGIEAEYHHKNNKVYCWKGLRF
SARQDLEGFSRFTEFGIEGVVPLELMPPEVRSKYQAKPNDKSKRVKKDETKGSVPPSEEN
QAINSVSEMDGEGGHNDLDAPAAAMDLDSTPITGQAGTPTPDDFQKQSSESPDAQEAGEL
DAEGDPEPGLIDGETDADVELEAVG
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgtctggacgaaactatgagaatgaaccctttctccttgggaccaggggggatgggcct
gctcaggagatttttaggaaagccttgttaaatcccgagctgcccgaaaaatttgccctt
caaactgttcaggaagccattaaaccccagaggcaaacaaagttagttctggatgaaaat
cagctgctagaaaacattctacggacattactccaagagttggtggcttgtgcagtacag
tcaggagagccaaccatgcactatggccgttccattgctgacggagatcttgcacagggt
caaattcctcgccttcttgatattgtattgtatctctgtgagaaggaacatgtggagggt
ggcatgatatttcagctgttggaagatttgactgaaatgtcaaccatgaagaattgcaaa
gatatttttacttacatagagagcaagcaagacttacttggaaagcaagaactgtttgct
cgtggcaaacttgtgatgctgaggacatgtaatcaactgcttcgtcgtttgtcaaaggca
aatgatgttgtattttgtggacggattcttatgtttctggcacattttttcccgctgtct
gagcgctcagctgtgaatattaagggagtcttcaatacatccaatgaaacaaagtatgag
aaagaagctccaaatggcatttctattgatttcaacttctacaagacattctggagtttg
caggagtacttctgtaatcctccatccttgaccgttaatcctacaaagtggcacagattt
acatcaagcttatcggttgttctaaatacctttgaggctcaacccttaagtgatgaggag
ggaaatgctaataatcttgaagaagagggggcagctgtcaatattaaatatctgaccagt
agtaaactgatgggtttggagctgaaagatcctagtttccggcgtcatgttcttgtacaa
tgtttgatattgtttgactatgtcaagccctctggaaagagtgacaaagatttaccatca
gaggcaatgaaagaagaaataaagacttatgaggagcgtgtaaagaatcttctcgaagtg
acacctcctaaagggaaagagtttctctgtagcattgagcatattctagaacgtgaaaaa
aattgggtttggtggaagcgtgatggttgcccgccatttgaaaaacaacccatggagaag
aaggtagatggtacaaaaaaacgtcgaccaaggtggagattagggaacaaagaactttct
cagctgtggaaatgggctgatcagaatccgaatgctctcactgatccagagcgagttaag
actcccgctgtcacagattactggaaaccaatggctgatgatatggatccgtctgctggt
atagaagctgagtaccatcacaaaaacaataaggtttattgttggaaaggtctccgtttt
tctgcgcgacaggacttggaaggcttttctaggttcactgaatttggcattgaaggggtt
gtgcccctggaacttatgcctcctgaagtaaggtccaagtatcaggcaaagccaaatgac
aagtctaaacgtgtgaagaaggatgaaactaagggttctgtacctccatctgaagaaaat
caggctataaactctgtaagtgagatggatggcgaaggtggccataatgatcttgatgcc
ccagcagctgcaatggacctggattcaacacctattactggtcaagctggcaccccgaca
ccagatgactttcaaaagcaaagttctgaatccccagatgcacaagaagctggagaactt
gacgctgaaggtgatcctgagccggggttaattgatggagagacagatgcagatgttgaa
ctagaggcagtaggttga

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