Chenopodium quinoa (quinoa): 110700274
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Entry
110700274 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110700274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110700274
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110700274
Spliceosome [BR:
cqi03041
]
Complex A
U2 snRNP components
U2 related factors
110700274
Complex B
110700274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110700274
NCBI-ProteinID:
XP_021733480
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MGESEDVKSKSRKEEIETKEESRRSRGREHEKERERDRDKERNGEKEKKRDREKDRESRR
SERDRSVDDKHRERERDRDREKHRDKHRDREKERKKDHKDKDGDRESREKEREKEKAKDR
EREEKEKEREKERDREREREKERERERERERERERDKERERERERERERRERERERERRE
RERERERERERVREERDKERERRRREAVIDDSGDERKDRDRKRRRRDDENKERDRERSKS
RDRERSKSKDRDKSRSHRHRDDSVDSQKKKSDDEPDRIQELMETKEQDMEEEQKRLDDEM
EKRRRRVQEWQELRRKKEEEERQQLGEANAEEPKAGKKWTLEGESDDEEPATEGQSDTDM
DVDRVFKPPVEAGEPMAVDVENGNALPNGGAAAAEEEDIDPLDAFMNSMVLPEVEKLSSA
VLDTESTELNGKDKNIEQSNGEVSKKAPKKFLGRIMPDEYSDPEYEDQEDGGMNLEDEDD
DEFVKRVKKTKAEKLAIVDHSKIDYIDVRKNFYIEVKDIAKMTLEEVDAYRKELELKVHG
KDVPKPIKTWHQTGLTTKILEVIRKMNFEKPMPIQTQALPVIMSGRDCIGIAKTGSGKTL
AFVLPMLRHIKDQPPLMSGDGPIGLIMAPTRELVQQIHNDIKKFAKVMNLTSVPVFGGSG
VAQQIGDLKKGAEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADRMFDMGFEPQIT
RIVQNIRPDRQTVLFSATFPRQVEVLAKKVLNKPVEIQVGGRSVVNRDITQMVEVRPESE
RFLRLLELLGEWYEKGKILVFVHSQDKCDALFKDLLKSGYPCLSLHGGKDQGDRESTLAD
FKSNVCNLLIATSIAARGLDVKDLELVVNFDVPNHYEDYVHRVGRTGRAGRKGHAITFIS
EDEERYAPDLVKALELSEQPLPQDLKALADGFLAKVRQGLEQAHGTGYGGSGFKFDEQED
EARKAAKKAQAKEYGFEFDKSDSEDEDDEVRKRTDVTVPNPALGGQGLPDTTGHPASVSG
TAGSVPGSILSINSADNPARAVALAASMKILQNLAKLQQDAMPEHYEAELEINDFPQNAR
WKVTHKETLGPISDWTGAAITTRGQYYPPGKVAGPNERKLYLFIEGRSEHSVKTAKAELK
RVLEDITSQAISLPGGAQPGRYSIL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatctgaggatgtgaaatcaaagtcgaggaaggaggagattgagaccaaggag
gagtctagaaggagtcgaggccgtgaacatgaaaaagaaagagaaagggacagggataag
gaaaggaatggggaaaaggagaaaaagagagacagggagaaggatagggagagtaggcgg
tcggagagagatagaagtgtagatgataagcatagggagagggaaagggatcgggataga
gagaagcacagggataaacacagggatagggagaaggagcggaaaaaggatcacaaagat
aaggatggagatagagaaagtagagagaaagagagagaaaaggagaaggcaaaggataga
gaacgagaggagaaagagaaggagcgggagaaagaaagggatagagagagggaacgggag
aaagaaagggaaagagagagggagcgagagagggaaagggaaagagataaagagagggag
agagaaagggaacgagagagggagaggagggaaagagaaagagaacgcgagaggagagaa
cgtgaaagagagagggagagggaaagggaaagggtgagggaagaaagagataaggagaga
gagaggcggcgccgtgaagcagtaattgatgacagtggcgatgagaggaaggacagagat
aggaaacggcgaaggagagatgatgagaacaaggagagagaccgagaacggagtaaatca
agagaccgagaaagaagtaaatcaaaagatcgagataaaagcagatcacataggcaccgg
gatgatagtgtggacagccagaagaagaagagtgatgatgagcctgacagaattcaggaa
ttaatggagacaaaggaacaggacatggaggaggaacagaagagattggatgatgagatg
gagaaacggaggaggagagttcaggaatggcaagagctgagaaggaaaaaggaagaagag
gaacgacaacagcttggggaggcaaatgctgaagaacctaaagcaggtaagaagtggaca
ctagaaggtgaatctgatgatgaagaacctgctacagaagggcagtcagatacagatatg
gatgtggatagagtatttaaaccgccagttgaagctggtgaacctatggctgttgatgtt
gagaatggaaatgcattacctaatgggggtgctgctgcagctgaagaggaagatattgat
cctctggatgcctttatgaactcaatggtgttgcctgaagttgagaaactgagtagtgct
gtgcttgatacagaaagtactgaattgaatggcaaggataaaaatattgaacaaagcaat
ggtgaggtgtctaagaaagctccaaagaaatttcttggaagaataatgcctgacgagtat
tcagaccctgagtacgaggatcaagaggacgggggaatgaatttagaggatgaagatgat
gatgagtttgttaaaagggtgaagaagactaaagctgagaaattagccatagttgatcat
tcaaagattgattatatagacgtcaggaagaatttttacattgaagtaaaggatattgca
aagatgactcttgaggaagttgatgcttacaggaaggagctggagctgaaagttcatgga
aaagatgtgccaaagccaatcaaaacctggcaccaaactggactaacaactaaaattctg
gaggtgatcagaaagatgaactttgagaagccaatgccaatccaaactcaggctttgccc
gtaattatgagtggtcgagattgcattggtattgcaaaaactggttcgggaaagaccttg
gcttttgtgttgccaatgttgaggcacattaaggaccagccacctttgatgtctggagat
ggtccaataggacttattatggcccctacaagagagctagtccagcaaattcacaatgac
ataaagaaatttgccaaagtaatgaatttgacctctgtacctgtatttggtggctcaggt
gttgcgcagcaaataggtgatctgaagaaaggagcagagattgttgtatgcacccctggt
agaatgatagatatactttgtacaagtggtggtaaaataacaaatcttagaagagttacc
ttcttggtcatggatgaagctgacaggatgtttgatatgggttttgaacctcagataacg
agaattgtccagaacataagaccagaccgtcaaactgtattattttctgctacctttcct
cgtcaggttgaggttttggcaaagaaagtcctgaataaaccggtggaaatccaggttggt
gggagaagtgttgttaacagagacataacccagatggttgaagttaggcctgaaagtgaa
aggtttcttagactcttggaactgcttggggagtggtatgaaaagggaaagattctggtc
tttgtccattcccaagataaatgtgatgcattgtttaaggatttactcaagagtggttat
ccttgtctttctcttcatggtggaaaagatcagggggaccgtgaatccacccttgcagat
tttaagagtaatgtgtgcaacttattgattgctactagcattgctgctaggggtcttgat
gtaaaggatcttgagctagtagttaatttcgatgtccccaaccattatgaagactatgtt
catcgtgttggccggacaggtcgtgctggtcgcaaggggcatgctattacttttatttct
gaagatgaagaaagatatgctcctgatcttgtgaaagctttggaactctcagagcagccc
cttccacaggatctgaaagcgcttgccgatgggttcttggcaaaggtgagacagggtctt
gagcaagcccatggaacaggttatggtggaagtgggtttaagtttgatgagcaggaggat
gaagcacggaaagcagcgaagaaagcacaggccaaagagtatggttttgagtttgacaag
tcagattcagaggatgaagacgatgaagtccgcaaaagaacagatgttactgtacccaac
cctgctcttggtgggcaagggttaccagatactacagggcatcctgcctcggtgtcgggc
acagctggctcagtgcctggctctatactgtcaatcaattcagcagataatccagctagg
gcagttgccctcgccgcatcaatgaagatactacagaatttagccaagctacaacaagat
gcaatgcctgagcactatgaggcagaacttgaaatcaatgatttcccacagaacgctcgc
tggaaggtgactcataaggagaccttgggtcctatatctgactggactggagctgccatc
acaactaggggacagtattatcctcctggcaaggttgcaggtcctaatgaacgtaaacta
tacctcttcatcgagggacgttcagagcattcagtcaaaacagctaaagcagaactgaag
agggttttggaggatatcacatcgcaagctatctctcttccaggcggggcccaacctggc
aggtattctattctctga
DBGET
integrated database retrieval system
