Chenopodium quinoa (quinoa): 110705847
Help
Entry
110705847 CDS
T05764
Name
(RefSeq) CHD3-type chromatin-remodeling factor PICKLE-like
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110705847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110705847
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110705847
Chromatin remodeling factors
NuRD complex
110705847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
DUF1087
Chromo
HDA2-3
ResIII
CHDCT2
PHD
PHD_4
DEAD
zf-HC5HC2H
Myb_DNA-binding
zf-HC5HC2H_2
C1_1
C1_2
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
110705847
NCBI-ProteinID:
XP_021739475
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MSSLVERLRVRSERRPVYNIDVSDDEVDLARGKSGNPSEKPERIAREDTKEDLCQTCGES
GNLLECETCSYAYHPKCLVPKLKAPFPADWKCPECVSPLNDIEKILDYETRPTAAEDGDA
STLGSKQIFVKQYLVKWKGYSYLHCTWVPEKQFIEAYKTLPRLKTKVNNFHRQMSSVNNS
EDDFAAVRSEWTTVDRILACRGDDEKEYLVKWKELQYDECSWEFESDISDFRPDIERFNK
IQSRRRRHSNKLKNVHRDSAESHKKPKEFQHYEQSPEFLSGGSLHPYQLEGLNFLRFSWS
KQTHVILADEMGLGKTIQSIAFLASLLEEGVYPHLVVAPLSTLRNWEREFATWAPQMNVI
MYVGSSQARSVIREYEFYYPKKSLSTKLKKKKSGQISSESKQDRIKFDVLLTSYEMINLD
SASLKPIKWECMIVDEGHRLKNKDSKLFLQLKQYQSKHRVLLTGTPLQNNLDELFMLMHF
LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVEL
SSKQKEYYKAILTRNYELLTRKGGGQISLINVVMELRKLCCHPYMLEGVEPLIPDSTESF
KQLLESSGKLQLLDKMMVKLKEQGHRVLIYTQFQNMLDILEDYMTYKKWQYERIDGKVSG
AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
LGQTNKVMIYRLITRGSIEERMMQMTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKE
LFVDETEEAKARQIHYDDAAIDRLLDRERAGDEETTLDEVDDNGFLKAFKVANFKYIDEA
EAAAKEAAAQKAAAETKSTVNSSERSVYWENLLKDKYEVHKVEEFNSLGKGKRSRKQMVS
VEDDDLAGLEDVSSDGEDDNYEAELTDSETTSSGVPSGRRTYKKRARVDGMEAFPLMEGE
GKSFRVLGFNQSQRAVFVQVLMRFGCGEFDWVEFVPRLKQKTYEEIKQYGALFLSHLSED
ITDSPNFSDGVPKEGLRVQDVLVRISTLIMIRDKVKSASGSPGDPLFADDILLRYPTLKG
GRVWKREHDLILLQAVLKHGYGRWQAILDDKDLRIQELICQELNLQVINLATLAVGGNQA
QSGSQMANNIEPSGDSVKGTVSQNISASEPAAGGADATTLLYQFREMQRRQVEFIKKRVL
LLEKGLQAECQKEVFGDGKSNGDYFEDSENGNKATHMATTTAEYTDKLPHIEVLAAEEVS
SASHDTDPKRQQLAEHYNQMCKILTENEKISVKASISNEADPNLGKTLYQLEDLCGKVNQ
IFAMPHSHPTAHGPASKDQKQHDVGQSSVQKLGQPSDSSPHFKAENMEVQATQTESNHGN
LPGQASEDVEMVDAEVDAKTQFDEGQGPATDEPVQKGEGK
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcttggtggagaggctccgtgtaaggtcagagcgaaggcctgtatacaacatc
gatgtatctgatgatgaggtggatttggcacgtggaaaatctgggaacccttcagagaag
cctgagaggatagctagagaagatacgaaagaagatttatgccaaacatgtggagaaagt
ggaaatctgctggagtgtgaaacttgttcttatgcttatcatcccaagtgcttagttcca
aaactgaaagcgcccttccctgctgattggaaatgtcccgaatgtgttagcccgctcaat
gacattgagaaaatactggactatgaaacgcgccctactgcagctgaggatggtgatgcc
tccacgttgggttcgaagcaaatatttgtcaagcagtatcttgtgaagtggaagggatat
tcctacttgcattgcacatgggtgcctgagaaacaatttattgaagcctataaaaccctt
cctcgtctgaagaccaaagtgaataactttcaccggcagatgtcatcagttaacaattca
gaagatgattttgctgctgttcgatctgaatggactactgttgatcggatcctcgcttgc
agaggagatgatgaaaaggagtacctcgtgaagtggaaagaactgcagtatgatgaatgt
tcttgggagtttgagtctgatatatctgatttcaggcccgatattgaaagattcaacaaa
atacagtctaggcgtcgtagacattctaataagctgaaaaacgtccaccgtgattctgca
gaatctcataagaaaccaaaagaatttcaacattatgaacagagtcctgaatttctatct
ggaggctcactgcatccttatcaactcgaagggctgaattttttacgcttctcatggtcc
aaacagacgcatgtgatacttgctgatgaaatgggtcttggcaagactattcagagtatt
gcttttttggcatctcttcttgaagaaggagtttatccccatctagtggtggcaccactg
tcaacgctgcgcaattgggaacgtgaatttgcaacttgggcaccgcaaatgaatgttatt
atgtatgttggttcttctcaagctcgtagtgtcatacgtgaatatgaattttactatcca
aaaaagtctctctcaacgaagcttaagaaaaagaaatctggtcagatttccagtgaaagc
aaacaagataggattaaatttgatgtcctgctcacgtcatatgaaatgatcaacctagat
tctgcatctctgaagccaattaaatgggagtgtatgattgtggatgagggtcaccgctta
aaaaacaaggattcaaaactatttcttcaattgaagcaatatcagagtaaacatcgtgtg
ctcctaactggaacacctcttcagaacaaccttgatgagctgttcatgttgatgcacttt
cttgatgctgggaagtttggaagcttggaggaattccaggaagagtttaaagatattaac
caagaggagcagatttcacggcttcacaagatgttggctcctcatcttcttcgaagggta
aagaaagatgtattgaaggaaatgcctcctaagaaagaactcatcttacgtgttgagcta
agtagtaagcaaaaggaatactataaggctattttgactcgtaactatgagcttctaact
cgtaagggcggtgggcagatatctcttatcaatgtggtcatggaattgcgaaagttatgc
tgtcatccttacatgctggagggtgtcgagccactaataccagattcaactgagtccttt
aaacaacttcttgaatcttctggaaaactgcagttgttggacaaaatgatggtgaagctt
aaggagcaaggacacagagttcttatttatactcaatttcagaatatgttggacatactt
gaagattacatgacatacaagaaatggcaatatgaacgtattgatggcaaggtcagtgga
gctgagagacaaattcgcatagatagattcaatgccaagaactcttccagattttgcttc
ttgctatctacaagagcaggaggcttagggataaaccttgctactgctgacacagttatt
atctatgacagcgattggaatccacatgctgatttgcaggcaatggccagagcacacagg
ctagggcaaactaataaggtcatgatttacagactcataacaagaggatcaattgaagaa
agaatgatgcagatgacaaagaagaagatggtattggagcatttagttgttggaaagcta
aagacacaaaatatcaatcaggaagagttggatgatatcatacgatatggctcaaaagag
ctttttgttgatgaaactgaagaggcaaaggcccgccagattcactatgatgatgctgca
atagatagattacttgatcgtgagcgcgctggagatgaagagactactttagatgaagtg
gatgacaacgggtttcttaaagcatttaaggtggcaaacttcaagtacatagatgaagct
gaagctgcagcaaaggaagcagcggcacagaaggctgctgctgaaaccaaaagcactgtg
aatagctcggaaagatccgtttattgggagaatttattaaaagataagtatgaggtgcac
aaagttgaggaatttaattctcttggaaaaggaaagagaagccgtaagcagatggtatct
gttgaagatgatgacttggctggtttagaagatgttagttctgatggtgaagatgacaat
tatgaggctgaattaaccgacagtgagacaacttcatctggagtaccttctggcagaagg
acttacaaaaagagagctcgtgttgatggtatggaagcttttccgctgatggaaggtgaa
gggaaatcatttagagtgcttggttttaatcagagccagagagctgtttttgtgcaagtt
ctgatgagatttggctgtggcgagtttgactgggtagagttcgtaccacggttgaaacag
aagacttacgaagaaatcaaacaatatggggcacttttcttgtctcatctctctgaggat
atcacggattcaccaaacttttcagatggtgttccaaaggaagggcttagagttcaagat
gttctcgtcagaatttcaaccctgatcatgattagggataaggtgaaatctgcttcagga
agccctggtgatcccctgtttgcagatgatatacttttgcgatatccaactttaaagggt
ggaagggtctggaagagagagcatgaccttatattattgcaagcagtgttgaagcacggg
tatggaagatggcaagctattcttgatgataaagacttgaggattcaggaacttatctgt
caagagttgaatcttcaagtgataaatcttgctacccttgctgttggaggtaatcaggca
caaagtggatcacaaatggcaaataatatagaaccatctggtgactctgtgaagggcact
gttagtcaaaatatttcagcttctgaacctgcagcaggaggtgcagatgctaccacctta
ttgtatcagtttcgagaaatgcaaagaagacaagttgagttcattaagaaaagggtgctg
cttttggagaagggcctacaagcagaatgtcagaaagaagtctttggtgatgggaagtct
aatggtgattattttgaagattctgaaaatggaaacaaagcaacacacatggcaactaca
acagcagaatatacagacaaacttcctcatattgaagtgctagctgcagaagaagtatct
tctgctagtcatgatactgatcctaaacgccagcagctggctgaacattataatcagatg
tgcaagatattgactgaaaatgaaaagatatctgttaaagctagtataagtaatgaagct
gatccgaatttgggcaagacactttaccagctagaagatctttgtggaaaggtcaaccaa
atttttgctatgcctcatagtcatcctactgcccatggacctgcatcaaaagatcagaaa
cagcatgatgtaggtcagagtagtgttcaaaaattaggccagccatctgattctagccca
cattttaaggcagagaacatggaggttcaagcaacccaaactgaaagtaatcatggtaac
ttacccgggcaagcttccgaggatgtggagatggtggatgcagaagttgatgcaaagaca
caatttgatgaaggacaaggtcctgctactgatgaacctgtgcagaaaggggaaggaaaa
tag
DBGET
integrated database retrieval system
