Chenopodium quinoa (quinoa): 110711659
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Entry
110711659 CDS
T05764
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03022
Basal transcription factors
cqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110711659
09124 Replication and repair
03420 Nucleotide excision repair
110711659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110711659
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110711659
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110711659
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110711659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Tfb4
VWA
Motif
Other DBs
NCBI-GeneID:
110711659
NCBI-ProteinID:
XP_021745769
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MSSIEHREVSNTRGKRLGRDEDEDDEDEDNDMSAWERAYTDERSWESLQEDESGLLRPID
NKSMYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV
EAFIREFFDQNPLSQIGLVGIKDGIAHCLTDMGGSPESHIMALMKKLECSGDASLQNALE
LVHECLNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSIVGLSAEMFICKH
ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYATANLIKMGFPQRAAEGVVSICVCH
KEAKVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFSNGN
IAGQKSLETCFGCMQSLTNPGTGSIYCVKCPKCKKYFCIDCDIYIHESLHNCPGCESLRH
STPVNAGV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcattgaacatagggaggttagcaatactagaggaaaacggcttggccgagac
gaagacgaggatgatgaagatgaggataatgatatgtctgcttgggagagagcctacact
gatgagagatcatgggagtctttgcaagaagacgagtctgggctacttcgtccaattgat
aataagtccatgtaccacgctcaataccgccgacgtatccgttccatctcttctacctca
acttctgctcgaattcagaaaggccttattcgatatatctatgttgtcatggatttctcc
agggcagctgcagagatggatttcaaaccaagcagaatggcagttgttgccaaacatgtg
gaggctttcataagagagttttttgaccagaatccacttagtcaaattggtcttgtgggg
attaaagatggcattgctcattgcttaacggatatgggtggtagcccagagtctcatatt
atggctttgatgaagaagttggagtgttcaggggatgcgtctttacagaacgccctagaa
cttgttcatgaatgcttaaatcaaattccatcatatggtcatcgcgaagttcttattttg
tattcggctcttagtacctgtgatccaggtgacataatggagactattcagaaatgcaaa
aagtcgaagattaggtgttcaatagtaggtctttctgcagagatgtttatttgcaaacat
atatgccaggaaacaggtggatcatatgctattgctttggatgagttccatctgaaagag
ttgttgctggagcatgcaccacctcctccagctattgctgaatatgcaactgctaacttg
atcaagatgggatttccacaaagagcggcggaaggtgtggtctcaatatgtgtatgtcat
aaggaggctaaggttggtgctggatacacctgtcctagatgcaaggctcgtgtttgtgag
ctgcccacagaatgtcgcatatgtgggctaacacttgtttcttctccccatttagcaagg
tcatatcatcatctcttcccaataacaccctttgatgaggtgtctttttcaaatgggaat
attgcgggacagaaatcactcgaaacatgttttggatgcatgcagagtctgacaaatcct
gggactggatccatttactgtgttaaatgcccaaaatgcaaaaagtatttctgcattgat
tgtgacatttatattcatgaaagtttgcataattgcccgggctgtgagagtttaagacat
tccactccagtcaatgctggtgtataa
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