Chenopodium quinoa (quinoa): 110713355
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Entry
110713355 CDS
T05764
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110713355
09122 Translation
03013 Nucleocytoplasmic transport
110713355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110713355
03041 Spliceosome [BR:
cqi03041
]
110713355
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110713355
Spliceosome [BR:
cqi03041
]
Complex C
Other components
EJC/TREX
110713355
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110713355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
110713355
NCBI-ProteinID:
XP_021747502
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MSGRNYENEPFLLGTRGDGPAQEIFRKALLNPEPPEKFALQTVQEAIKPQRQTKLVLDEN
QLLENILRTLLQELVSCAVQSGEPTMHYGRSIAEGVLAQGQIPRLLDIVLYLCEKEHVEG
GMIFQLLEDLTEMSTMKNCKDIFAYIESKQDLLGKQELFARGKLVMLRTCNQLLRRLSKA
NDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKEAPNGISIDFNFYKTFWSL
QEYFCNPPSLTVNPTKWHRFTSSLSVVLNTFEAQPLSDEEGNANNLEEEGAAVNIKYLTS
SKLMGLELKDPSFWRHVLVQCLILFDYVKPPGKSDKDLPSEAMKEEIKTYEERVKNLLEV
TPPRGKEFLCSIEHILEREKNWVWWKRDGCPPFEKQQLEKKVDGTKKRRPRWRLGNKELS
QLWKWADQNPNALTDPERVKTPAVTDYWKPMADDMDPSAGIEAEYHHKNNKVYCWKGLRF
SARQDLEDFSRFTEFGIEGVVPLELMPPEVRSKYQAKPNDKSKRVKKDETKGSVPPSEEN
QTLNSVSEMDGEGGQNDLDAPAAAMDLDSTPITGNNSQAGTPTPDDFLKQSSESPDAQEA
GELDAEADPEPGLIDGETDADVDLDAVG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacgaaactatgagaatgaaccctttctccttgggaccaggggggatgggcct
gctcaggagatttttaggaaagccttgttaaatcccgagccgcccgaaaaatttgccctt
caaactgttcaggaagccattaaaccccagaggcaaacaaagttagttctggatgaaaat
cagctgctagaaaacattctacggacattactccaagagttggtgtcttgtgcagtacag
tccggagagccaaccatgcattatggtcgttccattgctgaaggagttcttgcacagggt
caaattcctcgccttcttgatattgtgttgtatctttgtgagaaggaacatgtggagggt
ggcatgatatttcagctgttggaagatttgactgaaatgtcaaccatgaagaattgtaaa
gacatttttgcttacatagagagcaagcaagacttacttggaaagcaagaactgtttgct
cgtggcaaacttgtgatgctgaggacatgtaatcaactgcttcgtcgtttgtcaaaggca
aatgatgttgtattttgtggacggattcttatgtttctggcacattttttcccgctgtct
gagcgctcagctgtgaatattaagggagtcttcaatacatctaatgaaacaaagtatgag
aaagaagctccaaatggcatttctattgatttcaacttctacaagacgttctggagtttg
caggagtacttctgtaatcctccatccttgactgttaatcctacgaagtggcacagattt
acatcaagcttatcggttgttctaaatacctttgaggctcaacccttaagtgatgaggag
ggaaatgctaataatcttgaagaagagggggcagctgtcaatattaaatatctgaccagt
agtaaactgatgggcttggagctgaaagatcctagtttctggcgtcatgttcttgtacaa
tgcttgatattgtttgactatgtcaagccccctggaaagagtgataaagatttaccatca
gaagcaatgaaagaagaaataaagacttacgaggagcgtgtaaagaatcttcttgaagtg
acgcctcctagagggaaagagtttctctgtagtattgagcatattctagaacgtgaaaaa
aattgggtttggtggaagcgtgatggttgcccgccatttgaaaaacaacagctggagaag
aaggtagatggtacaaaaaaacgtcgaccaaggtggagattagggaacaaagaattatct
cagctgtggaaatgggctgatcagaatccgaatgctctcactgatccagagcgagttaag
actcccgctgtcacagattattggaaaccaatggctgatgatatggatccgtccgctggt
atagaagctgagtaccatcacaaaaacaataaggtttattgttggaaaggtctccgtttt
tctgcgcggcaggacttggaagatttttctaggttcactgaatttggcattgaaggggtt
gttcccctggaactcatgcctcctgaagtaaggtccaagtatcaggcaaagccaaatgac
aagtctaaacgtgtgaagaaagatgaaactaagggttctgtacctccatctgaagaaaat
cagactttaaactctgtaagtgagatggatggcgaaggtggccaaaatgatcttgatgcc
ccagcagctgcaatggaccttgattcaacacctattactggaaataattctcaagctggg
accccgacaccagatgattttcttaagcaaagttctgaatccccagatgcacaagaagct
ggagaacttgacgctgaagctgatcctgagccagggttaattgatggagagacagatgct
gatgttgatctagacgcagtaggttga
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