Chenopodium quinoa (quinoa): 110729382
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Entry
110729382 CDS
T05764
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110729382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110729382
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110729382
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110729382
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110729382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Motif
Other DBs
NCBI-GeneID:
110729382
NCBI-ProteinID:
XP_021764806
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MEMESSRRPPFDRSNLISKKPRLAEDPTLSGRQFQQPLQRSAIGSGSGATRFRANSGDRE
SDDSGRGSLQQLQQHQELVNQYKTALAELTFNSKPIITNLTIIAGENLQAAKAIAATICS
NILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAVKLPEVFCKAYRHVDPSIHAGMRHLFG
TWKGVFPPQPLQIIEKELGFSTAVNGASSGTTTSKSDSQSQRQPHSIHVNPKYLEARQRL
QQSSKMKGTDIGLTEVGSSEDAERPEKTAAAGTERPWMDPVMKMHNVRPQRESLRESGLP
KQGGAVYGDYDIASGLSRPLSTSGGKPSDRIVGQRWTGAGREGEESISGERNGYDIKHGI
PKYAAGRPASSGIPSVLKQPRIAAEMSGSWKNSEEEEFMWDDLGTKVDPGAASITKKEIW
SDDPEKVELNRHIPKWKSPVEVRSNIERELSSDSLSSEQKDQVPLGHPRSSHWKMQEPHQ
ADSSSPLLQQMSSHSVNGPNSSGVSSLGFSSASAGSMGRQPSPGQSVISQRPPSPSLSKR
DPRQSLIEKDHMRSSLVRSDPRVASISGKLNAGVRDKTFQGSMLNRQKLQATLQKPPSPT
TSFQQRHVPSSEQQPNSKSELSDIVQKAQQLLSSSAKKGTLSDSLNPIAGNMQGQSNVSS
LLAAVMKSGLLSGSPISGQMGVQPPSTTALTSQSAFITTKDDTFSSPHDSTAIVSRSKVE
MPSLVAPVPSSPMSSSLAQTSNAAAVKSNPLSILSTLISKGLISAPKTDAAAAAVSVKSD
SQIQAQSPIIASVTTVTTPSVSKVSATLPKPSNEKAPFLPDEKASDAIQNNKEEKDLIGF
EFKPRVLRDLHPAVIDRLCDDLPHKCTACGLQFKLQERFARHSEWHAFKNSIPNSVNKPS
RRWYSKPADWIAGKAGFPFGYNSTCLMEGSSRMREETEKMVPADESQCVCLLCGELFEDY
YSQERDEWMFKGAVYLSTQSRSSEEGGSCSESDLQNLIVHANCMSGDLGRDLGSIRGIKV
EKGT
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagagttctcgaagacctccgtttgatagatcgaatttgatttcaaaaaag
ccaagattagctgaagatccaactctcagcggccggcaatttcaacaaccgttgcaaaga
tcggcaattggttcggggtcaggtgcgactcgatttagagcgaattcgggtgatagagaa
tccgatgattcgggtcgtgggtctttacagcaattacagcagcatcaggagctggttaat
cagtataagacagctttagctgagctaacctttaattcgaagccgattattacgaacttg
acgattatcgcaggggagaatttgcaggctgccaaagccattgcggccaccatttgttct
aacattcttgaggttcctacagaacagaagttgccctcactttatctactggacagtatt
gtgaagaacattggtagagattacatcaagtattttgcagtaaagttacctgaggtgttt
tgcaaggcatacaggcatgtggatccttcaatacatgctggtatgaggcatctttttggg
acttggaaaggtgttttccctccccagccactgcagattattgaaaaagaactcggattc
tctactgctgtcaatggtgcatcatctggaactaccacatccaagtccgattcacagtct
cagcgtcagccacatagtattcatgtgaacccaaagtatttggaagcgagacagcgtctt
caacagtctagtaagatgaaaggaacagatattggtctcacagaggttggatcttctgag
gatgcagagagaccagagaaaactgctgctgcaggaactgaaaggccgtggatggatcct
gtaatgaaaatgcataatgtgcgtcctcaaagagaatcgttgagagaatccggtcttcca
aagcagggaggtgcagtgtatggagattatgatattgcatctggtctttcaagacctttg
agcacatcaggtggtaaacctagtgataggattgtcggacagagatggactggtgctggc
agagagggggaagaatctatttctggtgaaaggaatgggtatgatattaagcatgggatt
ccaaagtatgcagctggcagaccagcaagtagtggtataccttcagtgctgaaacagcca
agaatagctgctgagatgtctgggagctggaaaaactctgaagaagaggagttcatgtgg
gatgatttgggcaccaaggtggatcctggtgctgcaagcatcacaaagaaagaaatttgg
tctgacgatccggagaaagtggaattgaataggcacattcctaaatggaagagcccggtt
gaagtcagatccaacattgagagagaactttcttctgatagtctttcctctgaacagaaa
gatcaagtgcctcttggacatccaaggtcttcccactggaagatgcaggaacctcaccag
gctgatagttcaagtcctttgttacagcaaatgagctctcactccgtgaatggtcctaac
tcttctggagtctctagtttgggtttctcttcagcttctgcaggatctatggggcgtcaa
ccatctccaggccaatctgtgataagccagcgtccaccttctccttcattatctaaaagg
gatccccgtcaaagtctcattgagaaagatcatatgagatcttccttagttcgatctgat
cctagagtagcttctatctcagggaagttaaatgcaggggttcgtgataaaacttttcag
ggctctatgcttaatcggcaaaagttgcaagctactctgcagaaaccaccttctcctaca
acttcttttcaacaaaggcatgtcccatcttctgagcagcagcccaattcaaagtctgag
ctttctgatattgtccagaaagctcagcagctgcttagttcctcagcgaagaaaggtacc
ttgtcagatagtttgaatcctattgctggtaatatgcaaggtcagtcgaacgtgagtagt
ttattggctgccgttatgaaaagtggtttactttctggtagtcctatttctggacagatg
ggggttcaacctccttcaactactgctctcacctcacaatcagctttcattactacaaag
gatgatacattttcaagtcctcatgattcaaccgctattgtctcccgaagtaaagtagaa
atgccttcgctggtggctcctgttccttcatctcctatgagcagttcattggcacaaaca
tcgaatgcagcagctgtcaagtcaaacccactttcaatcttgagcacattgatatcaaag
gggttgatatctgcgccaaaaaccgatgcagctgctgccgcagtttccgtgaaatctgat
tcccagattcaagcacaaagcccgattattgcttctgtaactactgttacaactccatct
gtttccaaagtttctgctactctacctaaaccatctaatgaaaaggctcctttcctgccc
gatgaaaaggcatctgatgcaattcaaaacaataaagaagaaaaagatcttataggattt
gaatttaaacctcgtgtgctccgggatttgcatcctgctgtaattgacagactttgtgat
gaccttccacacaagtgcactgcatgtggtcttcaatttaaactgcaagaaaggtttgct
agacattcagagtggcacgcttttaaaaattcgataccaaattccgtgaataagccatcc
aggagatggtattcaaagcctgcggactggattgccgggaaggctggatttccatttggt
tataattccacttgtctcatggaggggtccagcaggatgagagaagagacagagaaaatg
gttcctgcagatgaaagtcaatgtgtgtgtcttttatgtggtgaactgtttgaagattac
tacagtcaagagagggatgaatggatgttcaagggagcagtttacttgtctacccaatct
agaagctctgaggaaggaggatcttgcagtgagagcgatttgcaaaatttgattgttcac
gccaactgtatgtcaggtgatttaggtcgtgacttgggatctatcaggggtattaaagtg
gaaaagggtacgtag
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integrated database retrieval system
