Chenopodium quinoa (quinoa): 110730889 Help Entry 110730889         CDS       T05764                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism cqi  Chenopodium quinoa (quinoa) Pathway cqi03030   DNA replication cqi03410   Base excision repair cqi03420   Nucleotide excision repair cqi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cqi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     110730889    03410 Base excision repair     110730889    03420 Nucleotide excision repair     110730889    03430 Mismatch repair     110730889  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cqi03032]     110730889    03400 DNA repair and recombination proteins [BR:cqi03400]     110730889 Enzymes [BR:cqi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      110730889     6.5.1.6  DNA ligase (ATP or NAD+)      110730889     6.5.1.7  DNA ligase (ATP, ADP or GTP)      110730889 DNA replication proteins [BR:cqi03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     110730889  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      110730889 DNA repair and recombination proteins [BR:cqi03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      110730889    NER (nucleotide excision repair)     Other NER factors      110730889    MMR (mismatch excision repair)     Other MMR factors      110730889 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  110730889 NCBI-ProteinID:  XP_021766409 LinkDB All DBs Position Unknown AA seq 844 aa AA seqDB search MSKKMLIDVECFCVSTFISSVAGERHMFIVIRPSSRHFFPPSLPKILGHCRMLKISHPSS SCFLIFRPLNTTIFSSTFSLLHFPTNFKLRAMSSTPPPSTPPSSTPPSSSSIFASMMGKA RESSKKKTQSPNKKTPKSSSSSPKKRKTLDPSPAIAENPNPTSISVEKPQESNSVVEMGT QKPELKNPFAKKPKVDLNVDEFVANLKIKPAKFDPNLAAWWGDGDKVPFLFLARAFDMIK GESGRIVITDITCNVLRTVIAKTPDDLLEVVYLLANKIAPAHQGLELGIGDATLIKALAE ACGATEANVKKLYKDLGDLGDVAKEIRSKQSMMRQPPPLTITKVFNTFQLIAKASGKDSQ ERKKNYIKSLIVAAKDCEPVYLMRLLQAKLRISLAEKTLLVALGQAAVYSEEHSKPPSDI QSPLEEAGKIVKQVYSVVPVYDKIIPALLSDGVWNLSKTCNFTPGVPIGPMLAKPTNGVS EIIDKFQDMVFTCEYKYDGERAQIHFMEDGSVDIYSRNAERNTEKFPDVVAALPRFKKPS VKSFILDCEIVAYDREKQKILPFQILSTRARKNVKMSEIKVDVCVFAFDILYLNGMPLLQ EQLDVRRKHLYDSFEEDCGYFQFATTLTSNDIEEIQKFLEASVNASCEGLIIKTLEKEAT YEPSKRSNNWLKLKKDYMDSVGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDSNNEEFQS ICKIGTGFSEAVLEERSSSLRSKVISIPKTYFRYGDNLKPDVWFEPSEVWEVKAADLTIS PVHRAAVGIVDSDKGISLRFPRLVRLREDKAPEDATSSDQVAEMYRSQANNPHRKTKDDL EEED NT seq 2535 nt NT seq  +upstreamnt  +downstreamnt atgagcaaaaaaatgctcattgatgtagagtgtttttgtgtatcaacgttcatttcatcc gtagccggcgagagacacatgttcatagtcatacggcctagttcccgccattttttccca ccttcactcccaaaaatccttggacattgtcgaatgttgaaaatctctcatccttcttcc tcttgctttctcatttttcgcccactcaacaccaccattttctcctccactttctctctc ctccatttccctacgaatttcaagcttcgagcaatgtcttctactcctcctccttcgact ccaccctcttctactcccccatcttcttcttccattttcgcatctatgatgggcaaagct cgagaatcttctaagaagaaaacccaatcccctaataaaaaaacccccaaatcttcttcc tcttctccaaagaaacgaaaaaccctagacccatctcccgcaattgcagaaaaccctaac cccacttcgatttctgttgagaaaccccaagaatccaattccgtggtagaaatgggtacc caaaagcctgaattgaaaaacccttttgctaagaaacctaaggttgatcttaatgtggat gaatttgttgctaatttgaagattaaaccggccaaattcgaccccaatttggctgcgtgg tggggggatggtgataaagttccttttctttttcttgctagggcgtttgatatgattaaa ggtgaatcgggtaggattgtgattactgatattacttgtaatgtgttgaggactgtcatt gcaaagactcctgatgatcttttggaggttgtttatcttttggccaacaagattgctcct gctcatcaaggtttggagctcggaatcggtgatgctacgcttattaaggcgcttgccgag gcttgtggagctactgaagcaaatgttaagaagttatacaaggatttaggtgatctcggg gatgtcgccaaagaaatccgttctaagcaaagtatgatgcggcaacctccaccactgacc attaccaaagtatttaatacattccagctcattgccaaggcatccgggaaggatagtcaa gaaagaaaaaagaattatatcaaatcacttattgtggctgccaaagattgtgaacctgtt tacttgatgcgactacttcaggcaaaattgcggattagtttggcagagaaaactcttctt gttgccctgggacaagctgcagtgtattccgaagagcattctaagcccccgtcagatatt caatctccactagaagaagctggaaagattgttaaacaagtttactcagtggttcctgtg tatgataaaattatccctgcccttctcagtgatggtgtatggaatttatcaaagacctgt aactttacaccaggtgttcctataggacctatgttagcgaaaccaacaaatggagtttca gaaatcatagataagtttcaagatatggtatttacttgtgagtacaagtatgatggagaa cgtgctcaaattcatttcatggaagatggttctgttgacatatacagccgaaatgctgaa aggaacacagagaaattccctgatgttgttgctgctcttccaaggttcaagaagccatct gtaaagtcttttattttggactgtgaaattgttgcttatgatcgtgagaagcagaagatt cttccttttcagatactaagcacccgagctcgcaaaaatgtcaaaatgagtgagataaag gttgatgtttgtgtcttcgctttcgacatattgtatttgaatggaatgccacttctccag gaacagcttgatgttcgtagaaagcatctttatgattcatttgaggaagattgtggatat tttcagtttgctacaacacttacatctaatgatattgaggaaatacagaagtttcttgaa gcgtctgtcaatgcgagttgtgaggggttgattatcaaaacattggaaaaagaggccacc tatgagccttcaaagagatctaataactggcttaaattgaaaaaggattacatggacagt gttggggactctttggatctggtgcctattggagcattccatggccgtgggaaacgaaca ggtgtttatggtgcttttctccttgcttgctatgacagtaacaatgaagagttccagagc atatgcaaaattggtactggtttttctgaggcagtgcttgaggaacgttcttccagtctt cgatctaaagtgatttcaattcctaagacatactttcggtatggagataacctgaaaccg gatgtctggtttgaaccttctgaggtatgggaggtcaaagcagctgacttgactattagt cctgttcaccgtgctgcagttggtattgtagattctgacaagggaatttctctccggttt ccacgtttggttcgtcttagagaagacaaagctcccgaggacgccacatcatctgatcag gtggcagaaatgtacagatctcaagcaaataatccacaccgcaaaacaaaagatgatttg gaagaagaggactga

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