Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ001186
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Entry
CpipJ_CPIJ001186 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CpipJ_CPIJ001186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ001186
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ001186
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CpipJ_CPIJ001186
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CpipJ_CPIJ001186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_helical
UTP20_N
Motif
Other DBs
NCBI-ProteinID:
EDS28698
VectorBase:
CPIJ001186
UniProt:
B0W2F2
LinkDB
All DBs
AA seq
511 aa
AA seq
DB search
MKSGPQPIWLNIGTVTYFLPKESSQVQPEVKLPILYLIDSIVKNVGKQYQSLFSQVIVST
FCGVFETVNERVREKMFSLRQTWNEVFPQSKLYALDIKINSIDPGWPITAQLKPKSPAIH
VNPMFLKNKVPEPNLDMQQQLRDKQRELLELQARKLELELIATKKRIEEQEKQLVLQTAS
VSKEPASELKRPASAVVQPAATVPNPRGRILPPNQGMINLVKSRDPRLARRNAGLGVPSA
ATAGVSSTVVAGVQIPAQPDSGRLGRIPKRVDPRLKAQQADADRKKVTSTTTSGGPSLKS
RAEYDPTKKRDRKDDARLGKTSSLKSSSSENKKKSSSESSPSKSPSSKKKSSSAEKSPSR
SEKSSPKSRESSSSKHNKISSSSSSESIKSATRRPRESSKSPNRNASPAANFESLVVPIT
NESKDVDLRVLLPEKKLKLDHQHHHQQANLVMKPVAGDQSVRGHVARSIDLAGVGGASCP
LAANVAFVPFRVVVRNNASIAEWRRSSFPHQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcggccctcaaccgatttggctcaacattggcacagttacttattttttacct
aaagaatcgagccaggttcagccggaggtcaagctaccgatcctgtacctcatcgattcg
atcgtcaagaacgtcggcaagcagtaccagtcgctgttcagtcaggtcatcgtaagcacc
ttctgcggggtgtttgaaacggtgaacgagcgggtccgcgagaaaatgttcagtctgcgc
cagacgtggaacgaggtgttccctcagtccaagctgtacgcgctggacatcaagatcaac
tcgatcgacccgggttggccgattacggcacagctaaagcccaagtcgccggccatccac
gtgaacccgatgtttctcaagaacaaggttcccgagccaaacctggacatgcaacagcag
cttcgcgacaagcagcgcgagctgttggaactacaggcccgaaagctcgagctggaactg
attgccacaaagaagcgcatcgaagagcaagagaagcaactggtgctgcaaacggccagt
gtttccaaagagcctgcttcagagctcaaacgaccggcaagtgcggttgttcaacctgct
gccacagttcctaacccccgaggtcgtattttgcccccgaaccagggaatgatcaacctg
gtcaaatcgcgcgacccccgtttggcgcgccgtaacgctggccttggcgtaccatcggcg
gccactgccggcgtgagctcgaccgtcgtcgctggcgtacagattcctgcccagccggac
agcggacgcctcggtcgcataccgaaacgggtcgatccacggctgaaggcccagcaagcg
gacgccgatcggaagaaagtaaccagtacaaccaccagcggtggcccctcgctgaaatcg
cgggccgagtacgaccccacaaagaagcgagatcgcaaggatgacgcccgactcggaaag
accagctcgctcaaatcgtcttcgtccgagaataagaaaaagtcctcctccgagtcgtct
ccttcgaagagtccgtcttccaagaaaaagtcatcttcggctgagaagtcgccgtcgcgt
agcgaaaagagttcgcccaagtcacgcgaaagcagcagcagcaagcacaacaagatctcc
agcagcagcagcagcgaaagcatcaaaagtgccacccgccgtccccgggaatcgtccaag
agtcccaaccgtaatgcttcaccggcggccaacttcgaaagcctggtggtgccgatcacc
aacgagtcgaaagatgtcgatctccgcgtgctgctgccggagaagaagctgaagctagac
caccaacaccaccatcaacaggcaaacttagttatgaaacccgtggccggcgatcaaagc
gtgcgtggccacgtggccaggtcgatcgatctggccggcgttggtggtgcaagttgtccg
ctcgccgcgaacgttgctttcgtgccatttcgtgtggttgtccgaaataatgccagtatt
gccgagtggcggcggtcgtcgtttccacaccaatag
DBGET
integrated database retrieval system
