Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ004242
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Entry
CpipJ_CPIJ004242 CDS
T01079
Name
(GenBank) TFIIH basal transcription factor complex p44 subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03022
Basal transcription factors
cqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CpipJ_CPIJ004242
09124 Replication and repair
03420 Nucleotide excision repair
CpipJ_CPIJ004242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ004242
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ004242
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CpipJ_CPIJ004242
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CpipJ_CPIJ004242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Motif
Other DBs
NCBI-ProteinID:
EDS41804
VectorBase:
CPIJ004242
UniProt:
B0WAT8
LinkDB
All DBs
AA seq
411 aa
AA seq
DB search
MADDEDPKEYRWETGYEKTWEAIKEDDDGLVEGSIAEIIQKAKRKRQAMKKGFSKLGMMR
HLYVILDCSEAMSVPDLKPTRLLCTLKLLEIFIEEFFDQNPISQLGVIAMKAKRAEKITE
LGGSCRKHIKAVGNLNKLNLTGEPSLQNGLELALKTLKMVPSHASREILVVMGSLTTCDP
TDIHITIDALKSEGIRCSVVSLSAEIRVCKFLCTETGGVYGAVLDDSHFKDQLLQHIDPP
QAGNQQEFSMIKMGFPHGKTEEGKDPPLTMCMCHIDSTDEPSKLTSGGYHCPQCYSKYCE
LPVECTACGLTLASAPHLARSYHHLFPVPHYQELPFQQQATNCYGCQKLFGETTDKTIYQ
CATCRQFFCIDCDIFVHETMHSCVGCTTIPASVQALHARKPVPPPHSMSLL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgaggatccaaaggagtaccgctgggaaaccggctacgagaaaacatgg
gaagcaatcaaggaagatgacgacggtctggtcgagggttcgatcgccgaaatcatccag
aaggccaaacgcaagcggcaagcgatgaaaaagggcttcagcaagctcggcatgatgcgc
cacttgtacgtgattctggactgctcggaggccatgtccgttccggatctgaagccaacg
cggctgctgtgcacgctcaagctgctggagatcttcatcgaggagttcttcgaccagaat
ccgatttcccagcttggggtgatcgctatgaaggccaagcgggcggagaagattacggag
ctgggcggaagttgccggaaacacatcaaggccgttggcaacttgaacaagctgaacctg
accggggaaccgtcgctgcagaacgggctggagttggcattgaagacgctgaagatggtt
ccttcgcacgcgagccgggagattctggtcgtgatgggcagtttgaccacgtgcgatcca
acggacattcacatcacgattgacgcgctcaaatcggaaggaattcgttgttcggtggtt
agtttgtcggcggagattcgcgtctgcaagttcctttgcacggaaaccggaggagtttac
ggggccgtcctagacgattcccatttcaaggatcagttgttgcagcacattgatccgccg
caggccggcaatcagcaggaattctccatgatcaagatgggcttcccgcacggaaaaact
gaagagggaaaagatccgccactaaccatgtgcatgtgccacattgacagcaccgacgaa
ccgtccaaactgacctccggcggatatcactgtccacagtgctacagcaagtactgcgaa
cttccggtggaatgcacggcctgcggtctgacactagcctccgcaccgcatctggcccgc
tcgtaccatcatctgttcccagtgccccactaccaggaactcccgttccagcagcaagcc
accaattgctacggctgtcagaaactgttcggtgagaccaccgataaaaccatttaccag
tgcgccacctgtcggcagttcttctgcatcgactgcgatatcttcgtgcacgagaccatg
cactcgtgcgtgggctgtacgacgattccggcttcggtgcaggcgctgcacgcccggaag
ccggttccgccgccgcacagtatgtcgttgttgtaa
DBGET
integrated database retrieval system
