Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005545
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Entry
CpipJ_CPIJ005545 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ005545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ005545
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpipJ_CPIJ005545
Spliceosome [BR:
cqu03041
]
Complex A
U2 snRNP components
U2 related factors
CpipJ_CPIJ005545
Complex B
CpipJ_CPIJ005545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-ProteinID:
EDS26949
VectorBase:
CPIJ005545
UniProt:
B0WGF2
LinkDB
All DBs
AA seq
942 aa
AA seq
DB search
MIYFSAQSVSSSGTGSSSGSSGFRQSKFDQKPPGFVEKEVKKPPKEEPKEEKESFDLAGP
MDKEEEQRRLEQEMIKRRERIERWRAERKRKEVEIKKPGGGSGINVPKKWSLEDDEEDDD
DDGEGKGSANDGEDDVDPLDAFMKEVNEEVRKVNKITGPAPKAAEGKAATSSGVTIITGV
AKKNTETVKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYLPF
RKVFYVEVPEIAKMTQTEVDAYKAELEGINVKGKGCPKPIRTWAHCGVTRKEFEVLRKLG
FEKPTPIQCQAIPAVMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEEAEGPIAIIM
SPTRELCMQIGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLA
ANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATFPRQMEALA
RRILKKPVEIQVGGRSVVCKEVEQHVVVLEEDAKFFKLLELLGLYQELGSIIVFVDKQEN
ADILLKDLMKASYPCMSLHGGIDQFDRDSTIIDFKQGRVKLLIATSVAARGLDVKQLILV
VNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTHEQGRYSGDIIRALELSGGTIPDDLRQ
LWETYKTTQEEQGKKVHTGGGFSGKGFKFDEQEAAAVNERKKMQKAALGLQDSDDDEDLE
QDIDQHIESMFATKRIVKEVEAPVITQTVTVPTPPVATNSDKLELAKRLASRINLQKSLG
FEAKGVTQQAAEAILKGSSTQQLITAKTVAEQLAAKLNTKLNYQPKDEEEAPVETNEQVF
RKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPPGKNPPEGERKLYLA
IESCSELAVTKAKREITRLIKEELLKLQASHHIVNKSRYKVI
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgatttattttagtgcacaaagcgtcagcagcagtggaacaggttccagcagcggcagt
agcggcttccggcagtctaaatttgaccagaagccgccgggcttcgtggagaaggaagtt
aagaagcctccgaaagaggagcccaaggaggaaaaggaatcgttcgatttggccggtccg
atggacaaggaagaagagcagcgaaggcttgaacaggagatgattaaacggcgagaacgg
atcgaacggtggagagcggagaggaagcggaaggaggttgaaattaagaagcctggtggc
gggtcgggaataaatgttccgaagaagtggagcttggaggatgatgaggaagacgatgac
gatgatggagagggcaagggtagtgccaatgacggggaggacgatgtcgatccgttggac
gcgtttatgaaggaagttaatgaggaggtgaggaaggtcaacaagattacgggaccggca
ccgaaggcggcggaaggcaaggctgcgacctcttcgggagttacaattattaccggagta
gccaagaagaatacggaaacggttaaaaagggcgaactgattgagcaaaaccaggacgga
cttgagtactcttccgaggaggagcaggaagacattaaggacactgcggccaacctggcc
aacaagcagaagaaagaactcgcaaaaatagatcattccggaatcaactatcttccgttc
cgtaaggttttctacgtagaagttccggagattgccaaaatgacacaaaccgaagtcgac
gcgtacaaggcggaactcgaaggcatcaacgtcaaaggcaaaggttgccccaaaccaatc
cggacctgggcccactgcggagtcacccgcaaagaatttgaagtcctccgaaagctaggc
ttcgagaaacccaccccaatccagtgtcaagccatccccgcggtcatgtccggccgagac
ctcatcggaatcgccaaaaccggaagtggcaaaacgctggccttcatcctgcccatgttc
cggcacgtgctagaccaacccccgctggaggaagccgaaggcccaatcgcgatcatcatg
tccccgacgcgcgaactctgcatgcaaatcggaaaggacatcaaaaagttcgccaaatcg
ctcaatctacgcgccgtgtgcgtctacgggggcaccggcatctccgagcaaatcgccgaa
cttaaacgcggtgcggaaatcatcgtctgcacgccgggccgaatgatcgacatgctagcg
gcgaattccggtcgcgttacgaacctacgccgagtaacgtacgtggtgctggacgaagcc
gatcgcatgttcgacatgggcttcgagccgcaggtgatgcgcatcatcgacaacatccgg
ccggaccggcagacggtcatgttcagcgcaacgttcccgcgccagatggaggcgttggcg
cgtcggatattgaagaagccggtcgagattcaagtcgggggacggtctgtagtttgcaag
gaggtcgaacagcacgtggtggtgctggaagaggacgccaagttcttcaagctgctcgag
ctgctcggactgtaccaagagctgggtagcatcatcgtgttcgtggacaagcaggagaac
gccgacatcctgcttaaagatctgatgaaggcttcgtatccgtgtatgagtctgcacggt
ggtatcgatcagttcgatcgggattctacgattattgactttaagcagggacgggttaag
ctgctgatagcgacttccgtggcggctcgaggactggacgtgaagcagctgattctggtg
gtgaattacgattgtcccaatcattacgaggattacgtgcacaggtgcggtcgcacgggt
cgcgccggcaacaaaggtttcgcgtggaccttcctcacgcacgagcagggccgctattcg
ggggatattatccgtgcgctcgagctctccggcggtaccattccggacgatctgcgccag
ctgtgggaaacgtacaagacaacgcaggaggagcagggcaagaaggtccacaccgggggt
ggcttcagcggcaaagggttcaaatttgacgagcaagaagcggcggccgttaatgagcgc
aagaagatgcaaaaggccgcacttgggttgcaggactcggacgacgatgaagatctggag
caggatattgatcagcacattgagagtatgtttgcgaccaagaggatcgtgaaggaggtg
gaagcgccggtcataacgcaaaccgtaacggttcctacgccgccggtggccacaaactcg
gacaagctggaactggccaagcggctggcttcgcgcatcaacctgcagaagagtcttggc
tttgaggcgaagggtgtgacgcaacaggcggcggaagcaatcctcaaaggaagctccacc
cagcagcttattacggcgaaaaccgtcgcggaacagctagccgcaaaactcaacaccaaa
ctcaactaccagcccaaagacgaggaagaggcaccggtcgagacgaacgagcaggttttc
cgcaagtacgaggaagagctggagatcaacgacttcccccagcaggccaggtggaaggtt
acttccaaggaggcgctggcacaaatttccgagtattcggaggcgggtcttacggtgcgc
ggtacgtacgttccgccgggtaagaacccgcccgagggcgaacgcaagctgtatctggcg
atcgagagctgctcggagctggcggtgaccaaggcgaagcgtgaaattacgcgcctcatc
aaggaggagctgctgaagctgcaggcgtcgcaccacattgtgaacaagtcgcgttacaaa
gttatttaa
DBGET
integrated database retrieval system
