KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ011203
Entry
CpipJ_CPIJ011203  CDS       T01079                                 
Name
(GenBank) splicing factor U2AF 50 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ011203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ011203
Spliceosome [BR:cqu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CpipJ_CPIJ011203
 Complex B
    CpipJ_CPIJ011203
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded Transformer RRM_9
Other DBs
NCBI-ProteinID: EDS37513
VectorBase: CPIJ011203
UniProt: B0WZJ9
LinkDB
AA seq 382 aa
MGFPSGGALDRDNRGGGGGGGGGGGRRHRSRSRSRDRRRSRSRGGGGGGGGGGGDRGDRR
RSRSRSPYRKGRSRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVP
VVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFA
FLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDSAVAPVQEKFSGVISTVV
PDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAEYVEYSITD
QAIAGLNGMQLGDKKLIVQRASVGAKNANVAAVAPVQIQIESPDIAICIVQVRAKPNTSQ
TEQEMSDEMAVSTSNNRLLRCA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgggttttccttccggcggtgctttagaccgggacaatcgcgggggcggcggtggcgga
ggaggaggcggtggccggagacatcgttcgcggtccagatcgcgggatcgtcgtaggagt
cgcagccgtggtgggggcggtggtggaggaggagggggcggagatcggggcgatcggagg
cggtcccggtcgcggtcaccgtaccgaaagggccgttctcgccgcaggaagccgtcgctg
tactgggatgttccgccgccagggttcgagcacattacgcccctgcagtacaaggccatg
caggccgccggacagattccggccaacatcgtggcggacactccgcaagcggcggtcccg
gttgtggggtcgaccatcacgcgccaggcgcgccgactgtacgtgggcaacattccgttc
ggcgtgacggaggaggaaatgatggagttcttcaaccagcagatgcacctttccgggttg
gctcaggccgccggcaatccggtgctggcctgccagatcaatctggacaagaactttgcc
ttcctggagttccgctcgatcgacgaaaccacccaggcgatggccttcgacgggatcaac
tttaaggggcagagtttgaagatacgccgaccgcacgattaccagccgatgccgggcatg
accgattcggcggttgcgccagttcaagagaaattcagcggcgtcatcagcacggtggtg
ccggattcgccccacaagatcttcatcggtggcctgcccaactatctgaacgaggaccag
gtcaaggaactgctgctgtcgttcggccagctgaaggcgttcaatctggtcaaggatgcc
gccaccgggcttagcaagggttacgccttcgccgagtacgtcgagtacagtatcactgat
caggcaattgctggcctcaacggtatgcagctcggcgacaagaagctaattgtgcaacgg
gccagcgtgggagcgaagaacgccaacgtggccgccgtggcgccggtgcagattcagata
gaatcaccggacattgcgatttgcattgttcaagtaagagcaaaaccgaacacttcgcaa
acggaacaggaaatgtcagacgaaatggctgtttcgacgtcgaataacaggttgctgcga
tgtgcatga

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