Crassaminicella indica: KVH43_08035
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Entry
KVH43_08035 CDS
T08466
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cras
Crassaminicella indica
Pathway
cras03410
Base excision repair
cras03430
Mismatch repair
cras03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cras00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KVH43_08035 (recJ)
03430 Mismatch repair
KVH43_08035 (recJ)
03440 Homologous recombination
KVH43_08035 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cras03400
]
KVH43_08035 (recJ)
DNA repair and recombination proteins [BR:
cras03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KVH43_08035 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KVH43_08035 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KVH43_08035 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXM05342
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All DBs
Position
1709431..1711167
Genome browser
AA seq
578 aa
AA seq
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MHKTNWEMIDKDKSIDHFDRADAIIKKILMNKGITTEEEIEEFLSEKPQKTYNPFLLKNM
KEIVNTIIDYINKKKSIWIYGDYDVDGIASISLLMDFLSNFTNNLHYYIPLREEEGYGLN
CDAIKDIKEKGGELIITVDCGSTSVEEVELAKNLGMEIIVTDHHNLSEEVPDCLILNPKQ
EDCPYPFKFLCGCGIAFKLAQAIQKNMGAPKKYLSDILDLVALATVADVVPLIDENRTLL
KYGLKKLNNPTRLGLKYLIEAVGLKDKNISAGHIGFVLGPHFNASGRIDDARAGVELLLS
KEQHKIKYLVEHLVTCNNERKAIQKKGLEICKAKVEKYYMNDLFLVIDSEGTHEGVIGIV
AGRIRDLYYKPTLIVTRSQDEGILKGSGRSIDDIDIYEEMKKCKDLFIKFGGHKNACGFS
IEESKLELLRKRLNEEAFKIKKQSPNKFVKTIKIECELKPSQITEEFVKALEKIEPYGMG
NEKPYFLIRQIKVDNNKEKVVMGKNHEHLRLRGVSEKYHDSTEILAVGFGLAENYVNELN
CPEIVDIVGFPNINEWNGYKNMQLMIRDMKAYKSNISE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaacaaattgggaaatgattgataaagataagtctatagatcattttgacagg
gcagatgctattataaaaaagattctgatgaataaaggtattactacagaagaagaaata
gaagagtttctttcggaaaaacctcaaaaaacttacaatccttttttattgaagaatatg
aaagaaattgtaaatactattattgattatatcaacaaaaaaaagagtatatggatttat
ggagattatgatgtagatggtatagctagtatttctttattgatggattttttgtcaaat
tttacaaataatcttcattattatattcctttaagggaagaggaaggctatggacttaat
tgtgatgctataaaagatattaaggaaaagggaggggaattaattataactgtggattgc
ggttcaacatcagtagaagaggttgaacttgcaaagaacttggggatggaaattattgta
acagatcaccataatctttctgaggaagtaccagattgcttgattcttaatccaaagcag
gaggattgtccttatccttttaaatttttatgtggctgtgggattgcatttaaactagca
caagctattcaaaaaaatatgggagcacctaaaaaatatttgagtgatatacttgattta
gtagcgttagcaacagtagcagatgttgttcctttaatagatgaaaatagaactctatta
aaatatggtctaaaaaagctgaacaatccaacaagactaggattaaaatatttaatagaa
gctgttggattaaaggataaaaatattagtgcagggcatattggatttgtattaggacct
cattttaatgctagtggaagaattgatgatgcaagagcaggagttgaactgcttctaagt
aaggaacagcataaaataaagtatttagtagagcatttagttacgtgcaataatgagaga
aaagctattcaaaaaaagggactagaaatttgtaaagctaaggtagaaaaatattatatg
aatgatcttttcttagtcattgattcagaagggactcatgaaggggttataggaattgtt
gcagggaggattagagatttatattataaacctactttaattgtaacaagatctcaagat
gaaggaatattaaaggggagtggaagaagtattgatgatatagatatttatgaagaaatg
aaaaaatgtaaggatttatttataaaatttggggggcataaaaacgcttgtggtttttct
attgaggaaagcaaattagagcttcttaggaaaagacttaatgaagaagcttttaaaata
aaaaaacagagtcctaataaatttgtgaaaacaataaagatagaatgtgaattgaagcca
tcacaaataacagaagaatttgtaaaagctttagaaaaaatagaaccttatggtatgggg
aatgaaaagccttattttcttataagacaaattaaagttgataataataaagaaaaggtt
gttatgggaaaaaatcatgagcatttaagattaagaggagtatctgaaaaatatcatgat
tctacggagattttagctgttggatttggattggcagaaaattatgtaaacgagcttaat
tgtcctgaaatagtagatatagtaggttttcctaacataaatgaatggaatggatacaaa
aatatgcagctaatgattcgagatatgaaagcgtataaaagtaatatttctgaataa
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