Capsella rubella (pink shepherd's-purse): 17876714
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Entry
17876714 CDS
T02984
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-2 isoform X2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17876714
Enzymes [BR:
crb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
17876714
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
17876714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
17876714
NCBI-ProteinID:
XP_006281579
UniProt:
R0EYX9
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MAPRWKWKGAEAKALAEPISNSVLELQLSLAKTESSGTLSSCNVLLAVEPEQAELLDRCC
FGRLVLSAEKVKKWIQLSFEEAFFLFHTLKCIKISLQGRCLENEVDTWMYMKSKRPNFPM
FYKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDRLRVWSDIHCA
VRLSGSVAKTLLTLYVNGNFKGEGLNLPACLEDFTVEEQTVSRWSPELSREDETTNSKPI
VTSATLKK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgagatggaaatggaaaggtgctgaagcaaaagctctcgccgaacctatttca
aattccgtattagagctccagctttctctagccaaaacagagtcctcgggtaccctctcg
agttgcaatgttcttctagcggttgagccagagcaagctgagcttctcgaccgttgttgt
tttggcagactcgttctatctgcagaaaaagtgaagaaatggattcagttatcttttgaa
gaagctttctttttgttccacactctcaaatgcatcaaaatctctcttcaaggtcgttgc
ttggagaatgaagtagacacatggatgtatatgaaatcaaaaagaccaaacttcccaatg
ttttacaaagcttattcacatctacgatcgaagaactgggttttgagatcagggttgcaa
tacggtgtggatttcgtggcataccgtcaccatccatctcttgtccactctgaatactcg
gttttggttcagtctggtgatagtgatcgactaagagtgtggtctgatatccattgtgct
gttcggttaagcggaagtgttgccaaaacgttgttgactctctacgtcaatggtaatttc
aaaggagagggattgaatctacctgcgtgtttggaggacttcacagtggaggaacagaca
gtaagtaggtggagtcccgaacttagtcgtgaagatgaaaccacaaattcaaaaccaatt
gttacctctgcgacattgaagaagtaa
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integrated database retrieval system
