Capsella rubella (pink shepherd's-purse): 17878330
Help
Entry
17878330 CDS
T02984
Name
(RefSeq) ABC transporter B family member 2 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17878330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17878330
04147 Exosome [BR:
crb04147
]
17878330
04090 CD molecules [BR:
crb04090
]
17878330
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17878330
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17878330
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17878330
CD molecules [BR:
crb04090
]
Proteins
17878330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_21
AAA_7
AAA_15
DUF87
APS_kinase
DUF815
nSTAND1
Motif
Other DBs
NCBI-GeneID:
17878330
NCBI-ProteinID:
XP_006282856
UniProt:
R0GG66
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MQPSGGDPTSPEKGKDEKSSPPKVSLLKLFSFADFYDCVLMTLGSIGACIHGASVPIFFI
FFGKLINIIGLAYLFPKQASHRVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKMR
RAYLRSMLSQDISLFDTEASTGEVISAITSDILVVQDALSEKVGNFLHYISRFIAGFAIG
FTSVWQISLVTLSIVPLIALAGGIYAFVAIGLIARVRKSYIKAGEIAEEVIGNVRTVQAF
TGEERAVRLYREALENTYKYGRKAGLTKGLGLGSLHCVLFLSWALLVWFTSVVVHKDIAD
GGKSFTTMLNVVIAGLSLGQAAPDISAFVRAKAAAYPIFKMIERNTVAKASAKSGRKLGK
VDGHIQFKDVTFSYPSRPNVVIFDKLNLAIPAGKIVALVGGSGSGKSTVISLMERFYEPI
SGAVLLDGNNINELDIKWLRGQIGLVNQEPALFATSIRENILYGKDDATAEEIARAAKLS
EAISFINNLPEGFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEK
SVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLISNPDGAYSSLL
RLQEAASLQRNPSLNRTLSKPHSIKYSRELSRSSFCSERESVTRPDGTLTSKKAKVKVGR
LYSMIRPDWMYGVCGTICAFIAGSQMPLFALGVSQALVSYYNSWDETQKEIKKIAILFCC
ASVITLIVYTIEHVCFGTMGERLTLRVRENMFRAILKNEIGWFDEVDNTSSMLASRLESD
ATLLKTIVVDRSTILLQNLGLVVTSFVIAFILNWRLTLVVLATFPLVISGHISEKLFMQG
YGGDLSKAYLKANMLAGESVSNIRTVAAFCAEEKILELYSRELLEPSRSSFRRGQIAGLF
YGISQFFIFSSYGLALWYGSTLMDKGLAGFKTVMKTFMVLIVTALAMGETLALAPDLLKG
NQMVASVFEILDRKTQIVGETNEELTNVEGTIELKGVHFSYPSRPDVVIFRDFDLIVRSG
KSMALVGQSGSGKSSVISLILRFYDPTAGKVMIEGKDIRKLDLKALRKHIGLVQQEPALF
ATTIYENILYGNEGASQSEVIESAMLANAHSFITSLPEGYSTKVGERGVQMSGGQRQRIA
IARAILKNPAILLLDEATSALDVESERVVQQALDRLMTNRTTVVVAHRLSTIKNADTISV
LHGGKIVEQGSHRKLVLNKTGPYFKLISLQQQQQP
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtccggtggtgatccgacgtcgccggagaaagggaaggatgagaagtcgtcg
ccgccgaaagtgtcactgcttaagctcttctccttcgcagatttctatgactgcgttctc
atgaccctcggatccatcggagcgtgcattcatggcgcatccgttcccatctttttcatc
ttctttggcaaactcatcaatattatcggtcttgcttatcttttccctaaacaagcctct
catcgagtcgccaagtactcattggattttgtatatctgagtgtggctatactattttca
tcatggttggaggttgcatgttggatgcatacgggagagaggcaagcggcgaagatgagg
agagcttatctccggtcgatgttaagccaagacataagcttattcgacactgaagcttca
accggagaagtcatctccgccatcacctccgacatcctcgtcgtccaagatgctctctcc
gagaaggtagggaatttcttgcactacataagccggttcatagccggttttgcaattgga
ttcactagtgtctggcaaataagtctcgtcacattatccatagtccccttaatcgctcta
gctggcggtatctacgctttcgtcgccattggacttatcgcccgtgtccgtaaatcatac
attaaggccggtgagattgcggaagaggtgatcgggaatgtcaggactgtacaagcattc
accggtgaagaaagggcggtgagattataccgagaagctcttgagaacacgtacaagtac
gggagaaaagccggattaaccaaaggactaggtcttggatccctgcattgtgtcttgttt
ctgtcttgggccttgctcgtatggtttacaagcgttgtggtccacaaagatattgccgat
ggtggcaaatcattcacaaccatgctcaatgttgttatcgctggcctgtctcttggacaa
gcggcgccagatatctctgcatttgtacgggcaaaagctgctgcttatccgattttcaag
atgattgaacgaaacacggtggcgaaagcaagcgcaaaatcgggtcgtaaacttgggaaa
gtagacgggcacattcaatttaaggacgtgactttcagttacccatctcgccccaatgtg
gtgatctttgacaagctaaacttagctatccctgccgggaaaatcgtggcacttgttgga
ggaagcgggtcagggaaaagcactgtcatatcattgatggagcggttctacgagcccatt
tctggagcagtgttgttagacgggaacaatatcaacgagctggatattaagtggttaagg
ggacagattggtttggttaaccaagaaccagctctttttgcaacatcgattcgagagaac
attttgtatggcaaagatgacgcgacagctgaggagattgctcgtgctgcaaagctctca
gaagcaatttcgttcatcaacaacctacctgaaggatttgagactcaggttggcgagaga
gggattcagctatccggtggacagaaacaaaggattgctatatcgagagcaatcgtgaag
aatccgtcaatactcttacttgatgaggcaacaagtgctttagacgcagagtcagaaaag
agcgtgcaagaagcactggatcgagtgatggttgggagaacaacggtagtggtggctcat
agactctcaaccgtaagaaatgctgacatcatagcagttgttcacgaagggaaaatcgtt
gagttcggaaaccatgagaacctcatatcaaatcccgacggagcctactcttcccttcta
cgtctccaggaggctgcctcattgcagcgtaacccttccttgaatcgcacgttaagcaag
ccacatagtataaaatactcgcgggaactatcaaggtcgagcttctgttcagaaagggaa
tcagtaactcgaccggatggaaccctaacatccaaaaaggcgaaagtaaaggtgggacgt
ctttactctatgatccgtccggactggatgtatggcgtgtgtggcacgatatgtgcattt
atcgctggatctcaaatgcccctttttgcgcttggagtctcgcaagccttggtttcctat
tacaatagttgggatgagactcaaaaagagatcaagaagatcgctatcctcttctgctgc
gcttccgtcatcaccctaatagtctacaccattgagcatgtctgcttcggtactatggga
gagcgtctcactcttcgtgtccgcgaaaatatgtttagagccatcttgaaaaatgaaatc
gggtggttcgatgaggtggacaacacaagttcaatgttggcatcgcggcttgagagtgat
gcgactttgcttaaaaccatagtggtcgataggtcgacgattctacttcagaacttaggt
cttgttgttacgtcttttgtcatcgccttcatacttaactggcgcctcactcttgtcgtc
ttggccacattcccattggttataagcggccatatcagtgagaaacttttcatgcaaggc
tatggaggagacttgagcaaagcatacttaaaggccaatatgttggcaggagagtctgtt
agtaacatccgcacggttgccgccttctgtgctgaggaaaagattctagaactttattca
agagagcttttagaaccttccagaagttctttcaggcgtggtcaaattgctggacttttc
tatggcatctctcagttcttcattttctcttcatatggcctcgccctctggtacggatca
acattgatggacaaaggattagcgggtttcaaaacagtgatgaaaacattcatggttttg
atcgtgacggcattagctatgggtgagacattggctctagctccggatctgctgaaagga
aaccagatggttgcgtctgtgttcgagatcttggacaggaaaactcagatcgttggagag
accaacgaggagctgactaatgtggaaggcacgattgagctcaaaggcgtccactttagc
tacccttctagaccggatgttgtaattttccgggactttgatctgatagttcggtcggga
aagagcatggcgctcgtcggacagagtggatccggtaaaagttctgtcatttcactcatt
ctccggttctatgatccgactgccggaaaagtcatgatagagggaaaagacatcaggaaa
ctagatctgaaagcactgaggaagcatattggtctagttcaacaagaacctgcacttttc
gccacaacaatctacgagaacattttgtatggaaacgaaggagcatctcaatctgaagtc
atcgaatcagctatgctagcaaacgctcacagcttcattacctctcttccggaaggctac
tccaccaaagttggtgaacgtggtgttcagatgtcaggcggacagcgacaaaggattgcc
atagctagagccatcctcaaaaatccagcgattctattacttgacgaagccacaagcgct
ttggacgttgaatctgagcgtgtggtacaacaagcattggatcggttaatgactaaccgg
acaacggtggtggttgctcaccggctatcgactatcaagaacgccgacacaataagtgta
ttacatggaggaaagattgtagagcaaggcagccaccgaaaactcgttctgaacaagact
ggtccatattttaaactcatcagtcttcagcagcagcaacaaccttaa
DBGET
integrated database retrieval system
