Capsella rubella (pink shepherd's-purse): 17878499
Help
Entry
17878499 CDS
T02984
Name
(RefSeq) sphingosine kinase 2 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00600
Sphingolipid metabolism
crb01100
Metabolic pathways
crb04148
Efferocytosis
Module
crb_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
17878499
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
17878499
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
17878499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
17878499
NCBI-ProteinID:
XP_006283583
UniProt:
R0F509
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MENDQMISPTDIITGIVFIDGELAMLTLTADGELRSTEYGLRKSLSMKKDVLGFVVEGKR
IRVKAVVEKDEGICCGRFSGDFARKDLVFEPLIDQTGWCYSLRQYLDSLGRPKRLLVFVN
PFGGKKSARDIFVKEVKPLFDDADVQLDIQETKYQLHAKEIVKSMDVSNYDGIVCVSGDG
VLVEVVNGLLERADWRTALKLPIGMVPAGTGNGMIKSLLDTVGLRCCANSATISIIRGHK
RSVDVATIAQGNTKFFSVLMLAWGLIADIDIESEKFRWMGSARIDLYALQRILCLRQYNG
RILFLPAPGFESYGHTASYGLYKEPPVSVKALGYQGPDTKFEDLEWREINGPFVTVWLHN
VPWGAENTLTAPAAKFSDGFLDLIVLKNCPKLVLLSLMRQLSSGTHVDSPYIDYLKVKAF
VLEPGALINEPEKEGIIDSDGEVLARGKKTYNCDKKALMTYDKLQITVDQGLATLFSPEY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgatcaaatgatatctccgactgatataatcaccggcatagtgtttatagac
ggtgagctggctatgttgactttgactgccgacggggagttacggtcgacagagtacgga
ctccgcaagagtttgtcgatgaagaaggatgttcttggttttgtcgtcgaaggtaagcgg
attagagtaaaggcagtggtggagaaagatgaaggaatctgctgtggacgatttagtgga
gatttcgccagaaaagatttggtctttgagcctctcatcgatcaaactggatggtgctat
agcctccgtcaatacctcgattctctcggccggcctaagagattgcttgtgtttgtgaat
ccctttggcgggaagaaatcggcgagggatatttttgtaaaggaagtgaagccattgttt
gatgatgccgatgttcaacttgatattcaagaaaccaagtatcagttgcatgcaaaggaa
attgttaagtccatggatgtatcgaattacgatggtattgtttgtgttagtggcgacggt
gttcttgttgaggtagtaaatggactgctcgaaagagcagactggagaactgccttaaaa
ttgccaatcggaatggtccctgcaggaactggtaatggcatgataaagtcattgttggac
acggttgggcttcgatgttgtgcaaatagcgctactatttctattatccgaggtcataaa
cgttctgtagatgtggcaactattgcacaagggaataccaaattcttcagtgtcttgatg
cttgcttggggtttaatagcagatatagacattgaatcagagaagttcagatggatggga
agtgctcgcattgacttatatgctcttcagaggatattatgtttaagacaatacaatgga
agaattttgtttctaccggctcctgggtttgaaagctacggacacacagccagttacggc
ctatacaaagagccacctgttagcgttaaggcactcggataccaaggacctgatacaaaa
tttgaagatcttgaatggagagaaatcaatggtccatttgttactgtatggcttcacaat
gttccctggggtgctgagaacactttaactgctcctgctgcaaagttttctgatggcttc
ttggacttgattgtcttgaaaaactgccctaagcttgtcctgctatcgcttatgagacag
ttgagcagtggcacacatgttgactcaccatatatagattatctaaaggttaaggcattt
gtgctagagccgggtgcacttataaatgaaccagagaaggaaggaatcatagattcagat
ggagaggttttggcgagaggaaagaaaacatataattgtgataaaaaagctttaatgact
tacgacaagcttcaaataacagttgatcaaggtttagccacactcttctctcctgaatat
tga
DBGET
integrated database retrieval system
