Capsella rubella (pink shepherd's-purse): 17879452
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Entry
17879452 CDS
T02984
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
crb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17879452
09124 Replication and repair
03420 Nucleotide excision repair
17879452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17879452
03400 DNA repair and recombination proteins [BR:
crb03400
]
17879452
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
17879452
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
17879452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
17879452
NCBI-ProteinID:
XP_006285003
UniProt:
R0F8F4
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVAVPA
TVLEEWVLADGASKHRVAIDRLIQLRIFSEITDRKRGTSYSLNPTFQNNLQKHIISGGVL
PREPMNSDNSIKLPSLQELETYALKQWERFLLQLINSGQGDKLNGISESMMKIFQRGLLS
QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYISNAEERKVDPADLISFLLELSFHVTGE
AYNSNTLTELQKNTLKDLEDLGLVKLQQGMKGNWFIPTKLATNLSVSLSDSSARKEGFVV
METNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFL
QQNSHPRCADRVPAIPENVTDQIRLWESDLKRIEMTQAHFYDEFPSKDVFEAACDFAREW
GGLLWEDSKRMRLVVKSEVHNQMREFLHTQSK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagttaagatcatcgcgaagaatttcatggacatggtggcgtctcttccagcc
atcaagcttgacaagctctacaacaatgtcttcatctgcgaggctattctcaggtctttg
ccgcctctagccaagaagtatgtattgcagatgttgtacattgatgttgctgtacctgct
acggtgttggaggagtgggtgctcgctgatggtgcctctaagcacagagttgctattgat
cgactgattcaattaaggattttttcagaaattacagataggaaaaggggaaccagttac
agcctaaatcctacatttcagaacaatcttcagaaacatattatttccggtggagtttta
cctagagagcctatgaattccgacaattccattaagcttccaagtctacaagaacttgag
acctatgcccttaagcaatgggagcgtttcttgctacaactcataaattcgggtcaaggg
gacaagctaaatgggatcagtgaatctatgatgaaaatcttccagcgaggtttattgagt
cagagagacaaggatggcccaagattaactgaaagtggctttcagtttttgctgatggat
acaaatgcccagctttggtacattatccgagaatacatatcgaatgccgaggagcgaaaa
gtagatccagcagacttaatttcgtttttgttagagcttagttttcatgtaactggtgag
gcatataactcaaataccttgacagagcttcaaaaaaatacactcaaggaccttgaagac
ttgggattagtcaagcttcaacagggaatgaaaggcaattggtttatacctactaaactg
gctacaaatttgtcagtcagtctgtcagattcatcagcccgaaaagagggatttgtcgtg
atggaaacgaacttcaggatgtatgcgtactccacatctaagttacagtgtgaaatttta
cgtctgtttgcgaggatagagtaccaacttccaaaccttattgcttgtgcaattacaaag
gagagtttgtacaatgcatttgacaatggcatcacatcagaccagattataacctttctc
cagcaaaattctcatccacgatgtgctgatcgagtcccagctattccagaaaatgtcacc
gatcagatacggctttgggagtcagatctaaagagaattgagatgacccaggcccacttt
tacgatgaatttccttcaaaagatgtgtttgaggcagcttgtgactttgctcgggaatgg
ggaggccttctttgggaagactctaagagaatgcgacttgtggtgaaatctgaagttcac
aatcaaatgcgtgagtttcttcatacccaaagcaaataa
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integrated database retrieval system
