Capsella rubella (pink shepherd's-purse): 17882383
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Entry
17882383 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
17882383
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17882383
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17882383
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17882383
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
17882383
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
17882383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
17882383
NCBI-ProteinID:
XP_006289281
UniProt:
R0GZ21
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT
IPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF
SLAVVNQVQTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA
VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE
GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
LKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE
HLRVRLKKEQEEKEDKRRYKAQAHLFTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRI
QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASN
KANTAELKLFLEVEHLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPM
DITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKPLVN
KEIECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGLD
DPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKI
FPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFL
VIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGA
FEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccccctcccgttgatcagccagaagatgaggagatgcttgtgccg
aattcagatttggtcgacggtcctgctcagcccatggaagttacccaacctgagactgct
gccagtactgtggagaaccagccagctgaggatccccctactctgaaattcacgtggact
atcccaaatttctctaggcaaaacaccaggaagcattactctgaagtatttgtcgttggg
ggttacaaatggcgcatattaattttcccaaaagggaacaatgtcgatcatttgtccatg
tacttggatgtttctgatgctgcgagtttgccttacggttggagcagatatgctcagttc
agtttggctgtagtcaatcaagtccagaccagatataccattagaaaagagacacaacat
caattcaatgcaagagaaagtgattggggatttacatcattcatgcctcttagtgaactc
tatgatcctagtagaggatatttagtgaatgatactgttttggttgaagctgaagttgct
gtacgtaaggttcttgattactggtcatatgactctaaaaaagagactggttttgttgga
ctcaagaaccaaggtgcaacttgttacatgaattctctcctacagacactataccacata
ccttacttcagaaaggctgtataccacatgccgacaactgagaatgatgcacccacagca
agtatacctttggctctccaaagtttgttttacaagctccaatataatgacactagtgtt
gctacaaaagagctgacaaagtcgtttggttgggatacatatgattctttcatgcaacat
gatgtgcaagaactcaatcgggttctctgcgaaaagcttgaggacaaaatgaagggaact
gttgtggagggaacaatacaacaactatttgagggccaccatatgaattatatcgagtgc
ataaatgtagatttcaaatctacacggaaagaatcattttatgaccttcagctagatgtt
aaaggctgcaaggatgtttatgcttcttttgacaagtatgttgaagttgaacgtcttgaa
ggggacaacaaatatcatgcagaaggacatggtttacaggatgcaaaaaaaggtgttctt
ttcattgactttccaccggttcttcaactccagctcaagaggtttgaatatgactttatg
agggacaccatggtgaagataaatgatcggtatgagtttcctctcgaactggatcttgat
agagaaaatggcaagtatctatcccctgatgctgacagaagtgttcgcaacctttacaca
cttcacagtgtcttagttcatagtggaggagtacatggtgggcactattacgcttttata
aggcctacactctcagatcagtggtataaatttgatgatgaacgagtaaccaaggaagat
ttgaaaagggcattggaggagcaatatggtggtgaagaagagctcccacagactaatcct
ggtttcaataaccctcctttcaaattcacaaagtactcgaatgcctacatgcttgtatat
atccgggaaagtgacaaagataaaataatctgcaacgttgatgaaaaagacatagcagaa
catttaagggtgaggctgaagaaagaacaagaagaaaaggaagataaaagaagatacaag
gcacaagctcacctatttacgataatcaaggttgcaagagatgaagaccttaaggaacaa
attgggaaagatatatattttgatcttgtggatcatgacaaagttcgcagtttccgtatc
cagaaacagacaccatttcaacaatttaaggaggaggtagccaaagaatttggtgtacct
gttcagttacagaggttttggatttgggcaaagcgacaaaatcatacctatcgtcccaat
cgcccccttactcctcaggaggaattacagccggttggacaaataagagaagcatctaac
aaggcaaacactgcagaactaaagcttttcctggaagtagagcatctggatttacgtcct
atccctcctcctgaaaaatcaaaagaagatattcttcttttctttaagctttatgacccc
gagaaagcagtattaagctatgctggcaggctgatggtgaaaagttccagtaagcctatg
gatataactggaaaactgaatgaaatggttggctttgctcctgatgaagaaatagaactt
tttgaggaaatcaagtttgaaccttgtgttatgtgcgaacacttggataagaaaacttca
ttcagattgtgtcaaattgaagatggagatatcatttgctttcagaaacctctagttaac
aaggagattgaatgccgatacccagctgtgccttcgtttcttgaatatgtccaaaataga
cagctggttcgttttcgtgctctggaaaaacctaaagaagacgagtttgttctggagttg
tcaaagctgcacacgtatgatgatgttgtggaaagagtggctgagaaacttggacttgat
gatccatccaaacttaggctaacatctcacaattgctattcccagcaacccaagcctcag
cctatcaaatatcgtggagtagaccatttgtcagatatgttagttcactacaatcagaca
tcggacattttgtactatgaagttctggatattcctcttccagaattgcaaggtcttaaa
accttaaaagttgctttccatcatgccacgaaggaagaagtggtaatccacaatatcaga
ctacctaaacaaagcacggtgggagatgttattaatgaacttaaaacaaaggtggaactt
tcacatccagatgcagaactgagattgcttgaggtgttttaccacaaaatctacaagatt
ttcccatcaactgaaagaattgagaatataaatgaccagtactggactttacgagctgag
gagattccggaagaagagaagaacatcggtccaaatgatcgcttaattcttgtgtaccac
tttgctaaggagactggacaaaaccagcaagtgcaaaactttggtgagcccttcttcttg
gtaatccatgaaggtgagactcttgaagaaatcaagaaccgtatccaaaagaagcttcat
gtatccgatgaggactttgccaagtggaagtttgcgtttatgtcaatggggcgtccagag
tacttgcaggacacagatgttgtttataatcggtttcagagaagagatgtctatggtgct
tttgagcagtacctcgggttggagcacgcagacactactcctaagagggcttatgctgca
aaccagaaccgacacgcatatgagaagccggtgaaaatatacaattag
DBGET
integrated database retrieval system
