Capsella rubella (pink shepherd's-purse): 17884706
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Entry
17884706 CDS
T02984
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17884706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17884706
04147 Exosome [BR:
crb04147
]
17884706
04090 CD molecules [BR:
crb04090
]
17884706
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17884706
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17884706
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17884706
CD molecules [BR:
crb04090
]
Proteins
17884706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_16
AAA_15
AAA_30
HTH_psq
Motif
Other DBs
NCBI-GeneID:
17884706
NCBI-ProteinID:
XP_006290501
UniProt:
R0H2C3
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MNISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYLDPGAESGGGTGTAAAQAEADEEVEE
QDEVEPPPAAVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIIDVLAFSN
DSTQQRSEHQFDRLVELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLN
QDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGFVNCWEIAL
ITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLAKYS
YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRIFVNNGRANGGEIIAALF
AVILSGLGLNQAATNFYSFDQGRIAAYRLFEMITRSSSVANQEGALLASVQGNIEFRNVY
FSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENI
KNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKNAHAHTFISSLEKG
YETQVGRAGLAMTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERVVQEALDLLMLG
RSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPRRMP
IRNYKESALFQVERDSSASCGIQEPSSPKMIKSPSLQRGNGVFRPQELSFNTEESPNDHS
PAPEKMRENGLPLDDADKEPTIKRQDSFEMRLPELPKIDVQCPQQKTNDSDPESPVSPLL
TSDPKNERSHSQTFSRPVSSSDDTTANGNAAKDAQHKISPSFWRLAQLSFPEWLYAVLGS
LGAAIFGSFNPLLAYAIALVVTTYYKYKGSHLREEVDKWCLIIACMGIVTVVANFLQHFY
FGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRLSIF
IQDSFAVIVALLIGLLLGWRLALVALATLPILTLSAIAQKLWLGGFSKGIQEMHRKASLV
LEDAVRNIYTVVAFCAGNKVMELYRMQLQRILRQSFLHGMVIGFAFGFSQFLLFACNALL
LWCTALSVNRGYMKLSTAITEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP
SIEPDDNSALKPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLKVSGGQTVAVVGVSGSGK
STIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQEPIIFSTTIRENIIYARH
NASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTPGQKQRIAIARVVLKNAPIIL
IDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH
DSLAAKNGLYVRLMQPHFGKGLRQHRLI
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctctagaggtttattcggatggtctccacctcatatgcaacccttaactcca
gtctctgaagtctccgagcctcccgagtctccttctccttatctcgaccctggtgctgag
tctggtggtggcaccggtacggcggcggcgcaagccgaggctgatgaagaggtggaggag
caagacgaggttgagcctcctcctgctgctgttcctttctctcagctcttcgcttgcgct
gaccggtttgattgggtccttatgattgttggctctgtagctgctgctgctcatggtact
gcgcttattgtctacttgcattacttcgccaagattattgatgttcttgctttctctaat
gattcgactcagcagagatctgagcatcagtttgaccggctcgtcgagctttcgttgact
attgtgtatattgccgggggtgttttcatttctggttggattgaggtttcttgctggata
ctgactggagagaggcagaccgctgtgatcaggtccaagtatgttcaagtactattaaat
caggatatgagtttctttgacacgtatggtaataatggggatattgtgagccaagtgctg
agcgatgtcttactcattcagtcagcgttaagcgaaaaagttggaaactatattcataac
atggctacgtttatcagtggacttgttattggatttgtcaactgctgggaaattgcattg
attacactcgccaccggtcctttcattgttgctgcaggaggcatatcaaatatatttctc
cacaggcttgctgagaatatacaagatgcatatgctgaagcagccggcattgctgaacag
gctatctcttacattaggactttatatgcctttacaaatgaaactcttgcaaaatattca
tatgcaacctcccttcaagcaaccctgagatacggcatattaattagtcttgtgcaaggc
cttggacttggatttacgtatgggcttgctatatgctcgtgtgccctgcaactttggatt
gggcgaatctttgttaacaatggaagggcaaatggtggagaaatcatagcagctcttttt
gctgttattttaagtggcttgggtttaaatcaagctgctaccaacttctattcttttgat
caaggaaggattgctgcgtatagactttttgagatgataactcgttcatcttctgtggct
aatcaagaaggagctctgctggcttctgttcaaggaaatattgagtttcgaaatgtgtat
ttcagttatttatcacgacctgaaattccaatcttgagtggtttttacctcacggtgcct
gctaaaaaagctgttgcacttgttggtagaaatggttctgggaaaagcagcatcattcct
ttaatggaacgattttatgatccaacattaggagaagttcttcttgatggagaaaatatc
aaaaatctaaaactggagtggctgagaagccaaataggcctggttacccaggaacctgct
ctgctaagtttgagcatacgagagaatattgcatatggtcgtgatgctacgcttgatcag
atagaagaggcagctaaaaatgcgcatgcccacacatttatcagttcacttgaaaaagga
tatgaaactcaggtcgggagagccggtttagcaatgactgaggagcagaaaataaaactt
tcgattgctagagctgtgctattgaatccaacaattcttctgctagacgaagtaactgga
ggtctagacttcgaagctgaaagagttgttcaggaagctcttgatcttctgatgttggga
cggtcaaccataataatcgcccgacggttaagtttgataaaaaatgctgactatattgcc
gtgatggaggagggtcagctcgttgaaatgggtacacacgatgaattgataaatcttggt
gggctgtatgctgagcttctaaagtgtgaagaagcaacaaagcttccaagaaggatgcca
attaggaactacaaggagtctgcattgtttcaggttgagagagactcgtcagctagctgt
ggcatccaagagccatcatcacccaaaatgatcaagtctccatcccttcaaagaggtaat
ggtgtgttccgtccccaggaattgagtttcaacactgaagaatcacctaatgatcatagc
cctgcacctgagaaaatgagagaaaatggcttgcctctggacgatgctgataaagagcca
acaatcaaaaggcaagatagtttcgagatgaggctaccagaacttccgaaaattgacgtt
cagtgtcctcaacaaaaaacaaacgactcagatccagagtcccctgtttctccccttttg
acatcagatcctaaaaacgagcgttcccattcgcagacgttcagtcgtcctgttagttct
tctgatgacactacagcaaatggtaatgcggctaaggatgctcaacacaaaatttcacct
tcattttggaggttggcgcagcttagtttcccagagtggctttatgctgtattagggagt
cttggtgctgccatctttggttctttcaatcctcttctggcttatgccattgcgttggtg
gtgacgacatattataaatacaaaggaagccacctacgtgaagaggttgacaaatggtgt
ttgatcattgcctgcatggggatagtgacagttgttgccaatttcttgcagcacttctat
tttggcattatgggagagaaaatgacggagagagttcggaggatgatgttctcagcaatg
ctgcgcaacgaagttggatggttcgatgatgaggagaacagcccagatacgttatccatg
cgtttagcaaatgatgctacttttgtccgagctgctttcagcaacaggctgtcgatattt
attcaagatagttttgctgttattgttgctcttcttattgggttgctgcttggttggcgt
ttggcccttgttgcattggcaactttgccaattctcacactttctgccattgctcagaaa
ttgtggcttggaggattctccaaaggcatacaggaaatgcatagaaaggcatctttagtc
ctcgaggatgctgttagaaacatctacactgttgttgctttctgtgctggtaacaaagtg
atggaactgtacaggatgcaactccagcggatactcagacagagctttctccatgggatg
gttattggttttgcgtttggtttctcacagtttcttctttttgcgtgcaatgcgctcctc
ctatggtgcactgcgttatctgttaaccgtggatatatgaaattatccacagctataaca
gagtacatggttttctcatttgctacatttgcccttgtcgagccatttggattagcacca
tacatcctcaagcgacgtaagtctcttatttcagtttttgagatcatagatcgagtccct
tcaattgaaccagatgataactctgctctcaaaccgcctaatgtctatggaagcattgaa
ctgaagaacatcgacttttgctatccaactcgacccgaggtacttgtgctgagcaacttc
agtctgaaagtaagtggtggacagaccgtggctgtggttggcgtttcgggttctggaaaa
agcacaataatctcactggtagagagatactacgacccagttgctggtcaagtcctacta
gatgggagagacttaaagttatataatttgagatggttgagaagccacatgggtttggtt
cagcaagaacccataattttttcgacaacaatcagagagaatatcatatatgcaagacat
aatgcgagtgaagctgagatgaaggaagcagcaagaattgcaaatgctcaccatttcatc
agcagcttacctcacggttacgacacacatatcgggatgagaggcgtggaacttaccccg
ggacagaaacagagaatagcaatagcgcgggtagtgctgaagaatgctcccatcatctta
atagatgaagcaagctcgtccatcgaatctgaatctagtcgggttgtgcaggaggctctt
gacacattgataatggggaacaaaactacaattctgatagcacatagagcagcaatgatg
agacatgtggataacattgtggttctcaatggagggaggatagtagaggaaggtacacat
gattctttagcagcgaagaacggattgtatgtccgtttgatgcaaccacatttcggtaaa
ggtctacgtcagcatcgacttatataa
DBGET
integrated database retrieval system
