Capsella rubella (pink shepherd's-purse): 17886584
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Entry
17886584 CDS
T02984
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 49 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17886584
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
17886584
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Helicases
17886584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
17886584
NCBI-ProteinID:
XP_006290801
UniProt:
R0H361
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDSSPPKTITNRLPRFSELKPPLSEDIIEALNWSGFEVCTPVQAETIPLLCSHKDVAVDA
ATGSGKTLAFLLPLVEIIRRSSSYPPKPHQVMGVIVSPTRELSAQIHKVAQPFVSTLPNV
NSVLLVGGRDVEADMNTLEEEGANLLIGTPGRLSDIMKRMEFLDFRDVEILILDEADRLL
DMGFQKQVNYIISRLPKQRRTGLFSATQTQAVAELAKAGLRNAMQVQSGAESKSKTPSGL
YCEYLECEADQKSSQLVHLLIENKNKKLIVFFMTCACVDYWGLVLSKIHSLKSISFFPTH
GKMDQKARDKALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRT
ARMERQGRAIVFLMPKEIDYVEFMHRRKVPLQKRKCSENASDVIPIIRSLAIKDRAVLEK
GLQAFVSFVRAYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQ
GITFEDIKFKNKSREKQRQQNLLARKEKPQQEKRKKSSKVAVDDSNKASRKRKLTGRQRQ
TIQTAQDEKEMNGDYSLLKKLKKGSITEDDFAKLTGAADDFV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgccgccgaagactatcaccaataggctgccgcgtttctctgaactcaaa
cctccgctctcagaagatatcatcgaggcgcttaactggtccggttttgaggtctgcact
ccggttcaggccgagacgatccctttgctctgcagccacaaggatgttgccgtggacgca
gccactggttctggaaaaaccctagcttttctccttcccctagtagagattatccgtcga
tccagctcctaccctccgaagccacaccaggtaatgggggtgattgtatctccaacgaga
gagctatcagcgcagatacataaagtggctcagccgtttgtctcgactttgcctaacgtg
aactctgttctgcttgttggaggtcgagacgttgaagctgacatgaatactctcgaagaa
gaaggagccaatctcttgatcggcacccctggaaggctttcagatataatgaaacgaatg
gagtttcttgatttccgagatgttgagattcttatcttagatgaggctgatagacttttg
gatatggggttccagaagcaggtcaattacattatctctcgcttaccaaagcaacgtagg
actggactcttttcagctacacaaacacaagctgttgcagagctggccaaggctggcctt
aggaatgctatgcaagttcaatcgggagctgagtctaagtccaaaacgccttctggtctg
tattgtgagtatttggaatgcgaagcagatcaaaagtcatcacaactagtgcatctcttg
atcgagaacaaaaataaaaagcttattgtattcttcatgacatgtgcttgtgttgattac
tggggactcgtactttcgaaaattcatagcctcaagtccatttccttctttcccacccat
gggaagatggatcagaaagctagagacaaggcattagcttcgtttacagaggcatcaagc
ggtgtccttctatgcacagatgtcgctgcacgcggacttgacattccaggcatcgattac
gttgttcagtatgaccccccacaagacccagatgtatttatccatagggttggcaggact
gcaagaatggaaagacaagggagggccattgtgtttttaatgcccaaggagatagactat
gtagagttcatgcacagacgaaaggtccctcttcagaagagaaaatgctctgagaacgct
tctgatgttatcccgattatacgttcactagccatcaaggaccgggcagtgttggagaag
ggattacaggcatttgtttcctttgtccgtgcttataaggagcatcactgctcttacatt
ttcagttggaaaggacttgaaatcgggaaattagccatgggatatgggatcttgtctttt
ccttacatatcagaagttaaacaagacagaattggcattgtcggttttacacctgtccaa
ggcatcacgtttgaggacataaaattcaagaacaagtctcgggagaaacaaagacagcaa
aacttactagcaaggaaagagaaaccgcaacaagagaaacgcaagaaaagctccaaagtg
gcggttgatgattctaacaaagcgtcgagaaagagaaagttaacggggaggcaaagacaa
actatccaaacagctcaagatgaaaaagaaatgaatggagattatagcttactgaaaaaa
ctgaagaaaggttcaattacagaagatgattttgcaaaacttacaggagcagctgatgat
tttgtctga
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