Capsella rubella (pink shepherd's-purse): 17887132
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Entry
17887132 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17887132
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00052
Galactose metabolism
crb00511
Other glycan degradation
crb00600
Sphingolipid metabolism
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
17887132
09103 Lipid metabolism
00600 Sphingolipid metabolism
17887132
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
17887132
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
17887132
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_ABD2
BetaGal_gal-bd
Motif
Other DBs
NCBI-GeneID:
17887132
NCBI-ProteinID:
XP_006293102
UniProt:
R0HLB2
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MVSLATRMILPSENGYRAWEDQTLFKWRKRDPHVTLRCHESVEGSLRYWYQRNNVDLAVS
KTAVWNDDAVQAALDSAAFWVDGLPFVKSLSGYWKFFLAPKPANVPENFYDAAFPDSDWD
ALPVPSNWQCHGFDRPIYTNVVYPFPNDPPHVPEDNPTGCYRTYFQIPKEWKDRRILLHF
EAVDSAFFAWINGNPIGYSQDSRLPAEFEISEYCYPWDSGKQNVLAVQVFRWSDGSYLED
QDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVKIDNMQESSKDLVLS
NFIIEAAVFSTKNWYNSEGFSSELSPKVANLTLNPSPSPVLGFHGYLLEGKLDSPNLWSA
EQPNVYILVLTLKDTSGKILDSESSIVGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRV
GKTNIESCMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLS
GHLKHPAKEPSWAAAMLDRVVGMVERDKNHTCIVSWSLGNEAGYGPNHSAMAGWIREKDP
SRLVHYEGGGSRTSSTDIICPMYMRVWDIVKIALDQNESRPLILCEYQHAMGNSNGNIDE
YWEAIDNTFGLQGGFIWDWVDQGLLKPGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDR
TPHPALHEVKYCYQPINVSLTDGTMKVANTYFFHTTEELEFSWTVHGDGLELGSGALSIP
VIKPQNSFDMEWKSGPWFSFWNDSNAGELFLTITAKLLSPTRSLETGHLVSSTQIPLPAK
RQIIPQALKKTDTIIACETVGDFIKISQQDSWELMINVRKGAIEGWKIQGVLLMNEAILP
CFWRAPTDNDKGGGDSSYFSRWKAAQLDDVEFLVESCSVKSITDKSVEIEFIYLGSSASG
SSKSEALFKVNVTYLIYGSGDIITNWIVEPNSDLPPLPRVGIEFHIEKTLDRVKWYGKGP
YECYPDRKSAAHVAIYEHNVGDMHVPYIVPGESGGRTDVRWVTFQNKDGLGIYVSTYGSS
SPMQMNASYYTTGELHRATHEEDLIKGKNIEVHLDHKHMGLGGDDSWTPCVHDKYLIPPQ
PYSFSLRLCPITAGTSVLDIYKDQLPC
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgctggcgacccgaatgattcttccttctgaaaatggttatagagcttgggag
gatcagacccttttcaagtggcgtaagagagatcctcatgtcaccttgcgttgccatgaa
tccgtcgaaggttctttgaggtactggtatcagcggaataacgtggatctcgccgtgtca
aaaactgctgtttggaacgatgatgctgttcaagctgctcttgacagcgctgctttttgg
gtcgatgggctgccctttgttaagtctttatctggttactggaagtttttcttggctcct
aaacctgcaaatgttccagaaaatttttatgatgctgcatttcctgattcagactgggac
gctttacccgttccttccaattggcaatgtcatggatttgatcggcctatctatacaaat
gtggtgtaccctttcccgaatgatcctcctcatgttcctgaggataatcctactggttgc
tacagaacctacttccagattcccaaagaatggaaggacagaagaatacttcttcacttt
gaagctgtagactccgcattcttcgcttggataaatggcaaccctattgggtacagtcaa
gacagcaggttaccagctgaatttgaaatatctgaatattgctatccatgggactcgggg
aaacaaaatgttcttgctgttcaagtctttagatggagtgatggttcatacctcgaagac
caagatcattggtggttgtctggtattcatcgagatgtgctattgttagcaaagcccaag
gtcttcattgctgactactttttcaagtcaaaattggcagatgacttttcatacgcagac
atccaggttgaagtgaagatagacaatatgcaggagtcctcaaaggatcttgttctttct
aacttcatcatagaggctgccgtatttagtactaaaaattggtacaactctgaaggattt
agttctgaactctctcccaaggtggctaatttgacgcttaatccttctccaagcccagtt
cttggatttcatggttatttgcttgagggaaaactggattctccaaatctctggtcagct
gaacaaccaaatgtttacattctcgttttaaccctaaaagatacatctgggaaaatactt
gattctgaatcaagtattgttggcattcgacaagtatcaaaggccttcaaacagcttctt
gttaatgggcacccagtcgtaataaaaggtgtaaacaggcatgagcaccatccacgtgtt
gggaaaacgaatatagagtcctgcatggtcaaggatttgatcatgatgaaagaatacaat
atcaatgcggtgcgaaacagtcattatcctcaacatccccgctggtatgaattatgcgat
ttgttcggcatgtacatgatcgatgaagccaatatagagacacatggttttgatctctcg
gggcatctgaagcaccccgcgaaagagccaagctgggcagctgctatgctagatagagta
gttgggatggttgagagagacaaaaaccatacgtgtatagtttcttggtcactgggaaac
gaggctggttatgggcctaatcattctgccatggcaggttggattagggaaaaggacccc
tcacggttggtacactatgaaggtggtggttccagaacaagttctactgatataatctgc
cctatgtacatgcgagtttgggacatcgtcaagattgcacttgatcaaaatgaatcacgg
ccattgatattatgcgagtatcaacatgctatgggtaacagcaacgggaatatagacgag
tactgggaggcaattgacaatacctttggcctgcaaggaggtttcatatgggactgggtt
gaccaggggctactgaaaccggggtcagatggcattaagcgttgggcatatggaggagac
tttggtgaccaacctaatgatttgaacttctgtctcaatgggcttatatggcctgaccga
actcctcatccagcactccatgaggttaagtattgttatcaaccaatcaacgtttcgttg
acggatggcaccatgaaggtagcaaacacttactttttccacacaacagaagaattggag
tttagctggacagttcatggggatggtcttgaacttggatctggggctctctccattcct
gtgataaagccacaaaatagttttgatatggagtggaagtcaggtccatggttttctttc
tggaatgactcaaatgctggagaattgtttctgacaataactgccaagcttttaagtcct
actcgttcacttgaaactggtcatctcgtgtcctcaacgcagattcctttaccagcaaag
agacaaataataccacaggcgttaaaaaagacagacactattatcgcttgtgaaactgtt
ggagatttcattaagatcagccagcaagattcatgggagctaatgataaatgttcgaaaa
ggagctattgaaggttggaagattcaaggagttctccttatgaacgaagctatactgcca
tgcttttggcgagcacctacagacaatgataaaggtggaggtgactctagttatttttcg
aggtggaaagcagcacagttggatgatgtggagtttcttgttgaaagctgttcagtaaag
agcatcactgataaatccgtagagatagagttcatttaccttggttcttcagcttctggc
tcttcaaagtcagaagccttattcaaagtcaatgtgacatatctgatatatggttccgga
gatatcatcaccaattggattgtcgaaccaaactctgatcttccaccgctaccacgtgtt
ggtatagaattccacattgaaaaaacattggaccgtgtgaaatggtatggaaaaggtcca
tatgagtgttacccagaccgaaaatcagcagcccatgtggcaatatatgaacacaatgtt
ggagacatgcatgtcccttatattgttccaggagaatccggaggtagaacagatgttagg
tgggtgacattccaaaacaaggatggtctaggaatttatgtttcaacatatggtagttct
tccccaatgcagatgaatgctagttactatacaaccggtgagcttcatcgtgcaacgcat
gaagaggatcttatcaaaggaaaaaacatcgaggtgcatctggaccacaaacacatgggt
cttgggggagatgatagctggactccgtgtgttcacgataagtatctgattccgccacaa
ccatattcattttctctcagattgtgtccaataactgcaggcacttcagtcttggacatc
tacaaggatcaacttccctgctag
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integrated database retrieval system
