Capsella rubella (pink shepherd's-purse): 17888360
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Entry
17888360 CDS
T02984
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17888360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17888360
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
17888360
Prokaryotic type
Archaeal type
TFB
17888360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Ribosomal_S27e
HTH_5
HTH_Tnp_ISL3
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
17888360
NCBI-ProteinID:
XP_006294641
UniProt:
R0HDD5
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAYCTDCKKETELVFDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG
GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG
LVATIKDRANEIYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK
KEIGRAKDYIVKTLGLETGQSVELGTIHAGDFMRRFCSNLGMSNHAVKAAQEAVQKSEEF
DIRRSPISIAAVVIYIITQLSDDKKTLKDISTATGVAEGTIRNSYKDLYPHLSKIAPSWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcgtattgtacggattgtaagaaggagacggagttggtgttcgatcactca
gccggagataccctttgctccgagtgtggtttggttttggaatcgcactctattgatgag
acctctgagtggcgtaccttcgctaatgagtcttccaacagcgatcccaatcgtgtcggt
ggtccaaccaaccctcttctcgccgatagtgctctaaccactgtcatcgccaagcccaat
ggttcctccggtgacttcttgtcttcttctctcggcaggtggcagaatcgtaactccaac
tccgatcgtggcttgattcaagcgtttaaaactatcgccaccatgtctgaaaggttggga
cttgttgcgactatcaaggatcgggctaatgagatatataagaggttggaggatcaaaag
tcaagcaggggaagaaatcaggatgcactttatgcagcctgcctgtacatcgcctgtcga
caggaggacaagccgcgaactattaaggaaatatgcgttattgccaatggggcgacaaag
aaggaaattggccgagctaaagactacattgttaaaacactgggactggagactggtcag
tctgtggaactaggcactattcacgctggtgatttcatgagaaggttctgctctaacctc
ggaatgtctaaccatgctgttaaagctgctcaagaagctgtgcaaaaatctgaggaattt
gatataaggaggagtcctatatcaatagcagcagtagttatttatataataacccagctt
tctgatgacaagaagactctcaaagatatatcgacagcaacaggagtagcagaagggaca
ataagaaattcatacaaagacttgtatccacatctttcaaagatagcaccaagttggtat
gctaaggaagaggatctcaaaaacctctcaagcccttga
DBGET
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