Capsella rubella (pink shepherd's-purse): 17890086
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Entry
17890086 CDS
T02984
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17890086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17890086
04147 Exosome [BR:
crb04147
]
17890086
04090 CD molecules [BR:
crb04090
]
17890086
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17890086
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17890086
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17890086
CD molecules [BR:
crb04090
]
Proteins
17890086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_21
DUF87
DUF815
AAA_30
nSTAND1
G-alpha
DEAD
AAA_15
SbcC_Walker_B
DLIC
Motif
Other DBs
NCBI-GeneID:
17890086
NCBI-ProteinID:
XP_023640786
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MASESGVNGDSNIVEEVSETKRGSKEEGETMKTEKKKKNKEEHDEKTKSVPFYKLFAFAD
SFDFLLMFLGTLGSIGNGLGFPIMTLLFGDLIDAFGQNQTDTTDKVSKIALKFVWLGIGT
FVAAFLQLSGWMISGERQAARIRSLYLKTILRQDIAFFDIDTNTGEVVGRMSGDTVLIQD
AMGEKVGKAIQLVSTFVGGFVIAFIRGWLLTLVMLSSIPLLVMAGALLAIVIAKTASRGQ
TAYAKAAVVVEQTIGSIRTVASFTGEKQAISNYNKHLVSAYKAGVIEGGSTGLGLGTLFL
VIFCSYALAVWYGGKLILDKGYTGGQVLNVIISVLTGSMSLGQASPCLSAFAAGQAAAYK
MFETIERKPDIDSYSTDGKVLDDIKGDIELKDVYFTYPARPEEQIFRGFSLFVSSGTTVA
LVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLKEFQLRWIRSKIGLVSQEPVLFTASI
KDNIAYGKEDATIEEIKSAAELANASKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARA
ILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTIVVAHRLSTVRNADMIAVIHQG
KIVEKGSHTELLKDTEGAYSQLIRLQEEKKSDENASDEKKMSSIESFKQSSLRKSSLGRS
LSKGGSSRGNSSRHSFNMFGFPAGIDGNDAQDQEESATEPKTKQKKVSIFRIAALNKPEI
PVLILGSISAAANGVILPLFGILLSSVIKAFFQPPKKLKEDTSFWAIIFMVLGFASIIAY
PAQTFFFGIAGCKLVQRIRGMCFEKVVHMEVGWFDEPENSSGTIGARLSADAATIRGLVG
DALAQTVQNLSSILAGLIIAFLACWQLSFVVLAMLPLIALNGFLYMKFMTGFSADAKKMY
GEASQVANDAVGSIRTVASFCAEDKVMNMYTKKCEGPMKTGIRQGIVSGIGFGFSFFVLF
ASYATSFYVGARLVDDGKTTFDAVFRVFFALTMAAMAISQSSSLSPDSSKADVAAASIFA
IMDRESKIDPSVESGRVLDNVRGDIELRHVSFKYPARPDVQIFQDLCLSIRAGKTVALVG
ESGSGKSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILFNDTIRAN
IAYGKGGDASESEIVSSAELSNAHGFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAIV
KDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVI
VEKGRHESLINIQDGVYASLVQLHLTAAS
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagagcggcgtaaacggagattcaaatatagttgaagaggtttctgagacc
aaacgaggcagcaaagaagaaggagaaactatgaaaacagagaagaagaagaagaacaag
gaagaacatgatgagaaaaccaaatcggtgccgttttacaagctctttgcttttgcagat
tcctttgatttcctcttgatgttcctcgggacgcttggatctatcggaaatggtctcggc
ttccctatcatgaccttactgttcggagaccttatagatgcttttggacagaatcagact
gatacaaccgacaaagtctccaaaattgctctgaagtttgtttggcttggaatcggtact
tttgtggctgcttttctccaattgtctggttggatgatttcgggagagagacaagcagcg
agaataaggagtttgtatctaaaaactatcttaagacaagatatcgcctttttcgacatc
gatacaaatacaggagaagtcgttggaagaatgtccggtgacactgtgctaatccaagat
gccatgggagagaaggtggggaaagctatacaacttgtatcaacatttgtgggaggcttt
gtgatagctttcattagaggatggcttctaactttggtcatgttatcctcaattcctctt
cttgtaatggctggtgctcttctggctatcgtcattgctaaaacagcttctcgtggacaa
actgcttacgcgaaagctgcggttgtagttgagcaaacaattggttctataagaacggtt
gcttcgtttactggagagaaacaagctataagcaattacaataaacatctggtctctgct
tacaaagcaggagtcattgaaggtggttcaactggattgggactaggaacactctttctt
gttatcttttgtagttacgctttagcggtatggtatggaggaaagctaatactggataaa
gggtacacaggaggacaagttcttaatgtcatcatctctgttttaactggatccatgtcg
ttaggtcaagcatcgccttgcctaagcgcgtttgcagctggacaagcagctgcttacaag
atgtttgagacaatagagagaaaacctgacatagattcttatagtacagacggtaaagtt
ttggatgacatcaagggagatattgagcttaaagatgtttatttcacttaccctgctaga
cccgaggagcaaatattccgtggattttcgttgtttgtctcgagtggtacaacggtggct
ttagttggacagagtgggagcgggaaatctactgttgtgagtctaattgagaggttttac
gatccacaagccggtgaagttctcatagatgggattaacttgaaagagtttcagctaaga
tggatcagaagcaagattggacttgtaagtcaagagccagttttgttcactgctagcatc
aaggataacatcgcttacggtaaagaagacgcgacaatcgaagagattaaatcagctgca
gagctagcaaacgcatctaaattcgtggataagcttccacagggtttggatacaatggtg
ggagaacacggaactcagctttcaggtggacaaaaacagagaatagctgtggctagagcg
attttaaaagatccaagaatcttgcttttggatgaagctacaagtgcacttgatgcagaa
tctgaaagagtggttcaagaagcacttgacagaatcatggttaaccgaactacaattgtg
gttgctcatcggttaagcacggtgagaaacgcagatatgatcgctgtgattcaccaagga
aagatagtagagaaaggttctcacacggaactactaaaggacacagaaggagcgtattct
cagctgattcggctacaagaagagaagaaatccgatgagaatgcatcggatgagaaaaag
atgtcatcgattgaatcattcaaacaatctagtttgagaaaatcgtcgctaggcagatct
ctaagcaaaggaggatcatccagaggaaacagcagccgccattctttcaatatgtttggc
tttccagcaggaattgacggaaacgacgctcaagatcaagaagagtctgctacagaaccg
aaaaccaaacaaaagaaagtctcaattttcagaatagctgctctaaacaaacccgagatt
ccagtacttatactcggatcaatatccgcagcagcaaacggtgttattcttcctcttttt
gggatactactctcaagtgtaatcaaagcatttttccaaccgcctaaaaagctaaaagaa
gatacaagcttctgggcaatcatattcatggtgcttggtttcgcatccatcatcgcatac
ccagcacaaacgttcttctttggcatagctggatgtaaattggtgcagaggatcagaggt
atgtgttttgagaaagtggttcacatggaagttggatggtttgacgagccagagaattca
agtggaaccataggagcaaggctatcagcagatgcagccacaatccgtggtctagtaggg
gatgctttggctcagacggttcaaaatctttcatctatattggctggtttgatcattgcg
ttcttggcttgttggcaattatccttcgttgtcctcgcgatgctcccgcttattgcactc
aatggatttctatacatgaagttcatgacaggtttcagcgcagatgcaaagaaaatgtat
ggggaagcaagccaagtggcgaatgacgcggtagggagcattagaaccgttgcttcattc
tgtgcagaagacaaagtgatgaacatgtacacaaagaaatgtgaaggtccaatgaagaca
gggattcgtcaaggcatagtcagtggtatcggtttcgggttctctttcttcgtcctcttc
gcttcttacgctaccagtttctacgttggagctcgccttgttgatgatggcaaaacaaca
tttgacgctgtcttcagggttttctttgctttgacaatggccgcaatggcgatatctcaa
tcgagttcgttatctcctgattcaagcaaagccgatgtagctgcggcgtcgattttcgca
atcatggacagggaatcaaagattgacccgagtgttgaatctggaagggtattggacaat
gttagaggagacattgagcttcgtcatgtgagtttcaaatacccagcaagaccagatgtt
caaatattccaagatctttgtctaagcattcgagccggaaagacagttgctttggtcggc
gaaagcgggagcgggaaatcaacggtgatcgcattgttgcagaggttttacgatccagat
tcaggtgagatcactcttgacggtgtagagatcaagagcctgcgattgaaatggttgaga
cagcagacgggacttgtgagccaagaaccaatattgttcaacgacacaattagagccaac
attgcatacggcaaaggaggggatgcgagtgaatccgaaatcgtatcgtcagctgaacta
tcaaacgcccatggattcatcagtggtctacaacagggttacgatacgatggtgggagaa
agaggaattcagttatcaggcgggcaaaagcaacgagtagcaatagctagagccatcgtc
aaggatccaaaggtattgctactcgacgaagcgacgagtgctctcgacgccgagtcagaa
cgagtggtccaagacgcgcttgaccgggttatggtaaaccggaccacaattgtggtggct
caccggttatcgacgattaaaaatgctgacgtaatcgccgtcgttaaaaacggcgttatc
gttgagaaaggaagacacgagagtttgatcaatatccaagacggagtttacgcttcgtta
gttcagcttcatctcactgcagcttcttaa
DBGET
integrated database retrieval system
