Capsella rubella (pink shepherd's-purse): 17890921
Help
Entry
17890921 CDS
T02984
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 23
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17890921
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
17890921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Spidroin_N
Prominin
Motif
Other DBs
NCBI-GeneID:
17890921
NCBI-ProteinID:
XP_006299740
UniProt:
R0I817
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MGFDGDKKKKCIIAGSVSGLLVIMVVSVAVVTSKHSPKAEENQIKKTTKAVQAVCAPTDF
KETCVNSLMSASPKSAEPLDLIKLGFDVTIKSINEGLKKASGDIKAKAGKDPDAKGAFEL
CEKLMVDAIEDLKKCMDHGFSVDRVEVFVEDLRVWLSGSIAFQQTCMDSFEEIKSNLMQD
MQNIFQTSKELSSNSLAMVSSMSTLFPSSNDTGLTGTLTNYARKLLSAEDGIPTWVRPEA
RRLLAAQGGGPGPVKANAVVAQDGSGQFKTIADALNAVPKGNTVPFVIHIKQGIYKEKVI
VTRKMPYVTFIGDGPNKTVITGSLNFGIGKVKTFLTGSITIEGDHFTAKNIGIENTAGPE
GGQAVALRVSADYAAFQSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNC
KIVVRKPKKGQSCMVTAQGRSNVRESTGLVLHNCHITGDSAYIPVKSESKAYLGRPWKEF
SRTIVMKTAIDDVIDPAGWLPWSGDFALKTLYYAEHLNTGPGSNQAHRVKWPGIKKLTPQ
DALLYTGDKFLGGETWIPQTQVPYTANM
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgatggtgataagaaaaagaaatgcatcattgccggtagtgtctccggtttg
ttagtcatcatggttgtctctgtagccgttgtaacgtctaagcactcacccaaagccgag
gaaaatcagatcaagaaaaccaccaaagcagttcaagcagtttgtgcacccactgacttc
aaagaaacttgtgttaacagcttaatgagcgcttctcccaaatccgctgagcctctagac
ctcatcaaactcggcttcgacgtcactatcaagtccatcaacgaaggcctcaaaaaagcg
tcaggagacattaaagccaaggctggcaaagacccagatgcaaagggtgcttttgagcta
tgtgaaaagctgatggttgatgctattgaggacttaaagaaatgtatggatcatggattc
tcggttgatagggttgaggtttttgttgaggatctacgggtttggctaagtggctccatc
gcattccagcaaacatgtatggactcctttgaggaaatcaagtccaatcttatgcaagac
atgcaaaacattttccaaacatcaaaagagcttagcagcaatagccttgccatggtttct
agcatgtccacccttttcccgagctccaacgacacaggactaaccggaactcttacaaac
tacgcgagaaagcttctgtctgcagaagatggtatcccaacatgggttcgaccagaggca
cgacggctcctggcagcacaaggtggaggacctggaccagtgaaggctaatgctgtggtg
gctcaagatggaagtggccagttcaagactatagcagatgctctaaacgctgtgcctaaa
ggcaacacagtgccattcgtcatccacatcaaacaaggtatctacaaggagaaagtcatt
gtcacccggaaaatgccatacgtcactttcatcggcgatggaccaaacaagacggtaatc
accggtagtctcaatttcggtatcggcaaggtcaagaccttcctaacaggctccatcaca
atagaaggcgaccacttcacagcgaagaacatcggaatcgagaacacagctggaccagaa
ggagggcaagccgtggcgttaagagtatcggcggattacgccgcgttccagagctgtcaa
atcgacggtcaccaagacacattatacgttcactctcaccggcaattctaccgtgactgc
acagtctccggtaccgtcgatttcatcttcggagacgcgaagtgcatcctccagaactgt
aaaatcgtcgtgcgaaagcctaagaaaggacagtcgtgtatggtgaccgcgcagggacga
agcaacgtccgtgaatcgaccggactggtgctccataactgccatataacaggagattcg
gcgtatatcccggtgaaatcggagagcaaagcttacctaggaaggccgtggaaggagttc
tcgaggacgatcgtcatgaagacggcgatcgatgacgtaatcgatccggcgggatggctt
ccgtggagtggggattttgcgctcaagacgctatactacgccgagcatttgaatacaggg
cctggatcgaatcaggcccatagagttaaatggcccggaattaagaaactaacgccccaa
gacgctctattatacactggcgacaaattcttaggtggcgagacttggatcccacaaacc
caagttccctataccgcgaacatgtag
DBGET
integrated database retrieval system
