Capsella rubella (pink shepherd's-purse): 17893648
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Entry
17893648 CDS
T02984
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17893648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17893648
04121 Ubiquitin system [BR:
crb04121
]
17893648
03029 Mitochondrial biogenesis [BR:
crb03029
]
17893648
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
17893648
Ubiquitin system [BR:
crb04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
17893648
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
17893648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
17893648
NCBI-ProteinID:
XP_023641135
LinkDB
All DBs
Position
Unknown
AA seq
225 aa
AA seq
DB search
MNSAGAVSDGRLTAEDFSVAARAFADKWKTHNQSFPPWSWVPLINRTLLLSNQQAEGYLS
LEKSIILSSLEESPEDESLHLATECSEKEESVDHAILVQNQENEAHYYDFHLVYSASYKV
PVLYFRGYCSDGQPLSLDVIKKDLPSCSVSLLAESKWTFITQEEHPYLNRPWFKLHPCGT
EDWIKLLSQSSISAGCQMPVELYLVSWFSVVGQVVGLRIPLEMLN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctggtgcggtcagcgacggtaggctcaccgcggaagatttctctgtagcc
gctcgagcttttgccgataaatggaaaactcataaccaatcattccctccatggtcatgg
gttcctctgatcaatcgaactctacttctttcaaatcagcaggcggaaggttacttgtcg
ctcgagaagagcatcattctcagttcacttgaggaaagtccagaggatgaatctctgcat
ttagctactgagtgctcggaaaaagaagaatcagttgatcacgcaatcttggtccagaac
caagaaaatgaagcacattactatgattttcatttagtttacagtgcatcatacaaggtt
cctgtgttatattttcgcggatattgcagcgatggacaacctctatctttggacgtcata
aaaaaggatctgccctcatgctctgttagtcttttggctgaatctaagtggacgtttata
acacaggaggagcatccatatttgaacaggccatggttcaagctacatccctgtgggact
gaggattggatcaagctgctttcccaaagtagcatctctgctggatgccagatgccagtt
gagttgtatttggtttcatggttctctgttgtcgggcaggttgttggtcttaggatccct
cttgagatgctgaattag
DBGET
integrated database retrieval system
