Capsella rubella (pink shepherd's-purse): 17894935
Help
Entry
17894935 CDS
T02984
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00052
Galactose metabolism
crb00511
Other glycan degradation
crb00531
Glycosaminoglycan degradation
crb00600
Sphingolipid metabolism
crb00604
Glycosphingolipid biosynthesis - ganglio series
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
17894935
09103 Lipid metabolism
00600 Sphingolipid metabolism
17894935
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
17894935
00604 Glycosphingolipid biosynthesis - ganglio series
17894935
00511 Other glycan degradation
17894935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17894935
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
17894935
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17894935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
TgpA_N
5_nucleotid_C
Motif
Other DBs
NCBI-GeneID:
17894935
NCBI-ProteinID:
XP_006301850
UniProt:
R0IDI0
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MVMTSRRSWPSTRRHQLAFVLLLVLVALGICVPVFALLPSLSSPQSLFRGDKMISRRFYI
KADVFWKDENPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQVYVPWNLHEPKPGIM
VFEGIGDLVSFLKLCDNLDFLVMLRAGPYICGEWDLGGFPAWLLAVKPRLQLRTSDPAYL
KLVERWWDVLLPKVFPLLYSNGGPVIMVQIENEYGSYGHDKAYLRNLVSMAREHLGDDVI
VYTTDGGTRETLEKGTVPVDDVYSAVDFTTGDDPWPIFELQKKFNAPGRSPPLSSEFYTG
WLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSEEFDYKPD
LTSYDYDAPIKESGDIDNPKFQALQRVIKKYNTAPHSITPSKQLKAYGPIKMQMTTSLFD
LVSMTDPADMITSANPISMESSGQMFGFLLYESSYITKKSGNILRIPKVHDRAQVFVSCL
SQEANEGVLRYIGTTERWNNQPISLPTIECTSNTSLFILVENMGRVNYGSYIFDEKGILS
SVYLDGQILHGWKMIPIPFQNLNQRPNLSFEMHHNRKRSEKSNLTNDVGQKEPALFAGEF
SINSAEEIKDTYLSFNGWGKGVAFVNKFNIGRYWPSVGPQCNLYVPAPLLKPGKNTLVIF
ELESPHLELLLEAVDQQDFTCGSNNSKVNQL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgacaagcaggcgtagctggccatcaacgagaagacatcaactggctttcgtg
ttgctcctggttcttgtagctctcggaatctgcgttcctgtctttgctcttcttccttca
ttgtcctctcctcagtctctatttcggggtgacaagatgatatctcggaggttttatatt
aaagctgacgttttctggaaagatgagaatccttttcagatcattggtggtgatttgcat
tactttcgtgttcttcctgagtactgggaagatcgtcttctaagagccaaggctctaggc
cttaatactattcaagtatacgttccttggaatctccatgagccaaagcccggaattatg
gtttttgagggtattggtgatcttgtgtcctttctcaagctctgtgacaatctagatttt
ctagttatgttgcgtgcaggaccttatatctgtggagaatgggatttggggggatttcct
gcttggttacttgctgtgaaaccacgtctccaactaaggacatcggatcctgcgtatctt
aagttggttgaaagatggtgggatgttctgttaccgaaagtatttcctctgctttacagc
aacgggggtcctgttataatggttcagattgaaaacgaatatggttcatatggacatgac
aaagcctatcttcgtaatttagttagtatggctagggaacacctgggggatgacgttatt
gtgtacacaaccgatggagggacaagagaaacacttgagaaaggaactgtccctgtagat
gatgtctactcagctgttgatttcacaaccggtgatgatccttggccaatatttgaattg
caaaaaaagtttaatgctccaggaaggtcacctccactttcctcggagttctatactggt
tggctcacgcattggggtgagaagattgcaaaaaccgatgctgagtttacagcagcttct
cttgaaaaaatactgtctcgaaatggttctgctgtgctttatatggtgcatggaggaaca
aactttggtttctacaatggtgcaaatactggctctgaagagtttgactataaacctgat
ctgacatcctatgactatgatgctcccattaaggagtcaggtgacatagataatccaaaa
ttccaagctcttcagagagtgattaagaagtacaatactgcaccacactccattaccccc
tccaagcaactgaaagcgtatggtcctatcaagatgcagatgacaacatcgctatttgat
ttagttagtatgacagatcctgcagatatgatcacctcagccaacccaatttcaatggag
tcttctggacagatgtttggatttcttttatatgaatcttcatacattacaaaaaagagt
gggaatatactaagaatacccaaggttcatgacagagctcaagtgtttgtttcgtgcctt
tcccaagaggctaatgagggagtactgagatacattggtacaactgagagatggaacaac
caacctatatctcttccaactattgagtgtacctccaacactagcttatttattctggtt
gaaaacatgggtcgtgtaaattacgggtcatatatctttgatgagaagggtattttgtct
tcggtatatctagatggtcaaattctccatggatggaagatgataccaatcccatttcaa
aacctgaatcaaaggccaaatctcagtttcgagatgcatcataacagaaagagaagtgag
aagtccaatcttactaatgatgtcggtcaaaaggaaccagctctgtttgctggtgagttc
tctatcaacagtgcagaagaaatcaaagacacatatctatcattcaatggctggggtaaa
ggagttgcttttgtgaataaattcaacatcggaagatattggccgtctgttggaccgcag
tgcaacctctatgttcctgcaccgcttcttaaacctggtaaaaatactttggtgattttc
gagttggaatctccacatctcgagcttttgctggaggcagtggatcagcaagacttcaca
tgcggttcaaataattctaaagtcaatcaactatag
DBGET
integrated database retrieval system
