Capsella rubella (pink shepherd's-purse): 17896444
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Entry
17896444 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17896444
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17896444
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17896444
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17896444
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
17896444
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
17896444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
TSNAXIP1_N
DUF1574
Motif
Other DBs
NCBI-GeneID:
17896444
NCBI-ProteinID:
XP_006302540
UniProt:
R0IFB2
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEEMYSLDLDSLNNLRPVYGLIFLFKWQAGEKDD
RPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFSKNFPSDLKGL
AINNSEAIRTAHNSFARPEPFVPEEQKSATKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGPCPGDQSGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKDIYTAELKDLQRQRE
QLLQQANGMDKTEAETLNPLIEEVSIGIEAVSDKIIMEEEKFMKWKTENIRRKHNYIPFL
FNFLKLLAEKKQLKPLIEKAMKQKTESST
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcacgattgagtcagatcctggtgtgtttacagagcttattcaacaaatg
caagtcaaaggagtgcaggttgaagaaatgtattcgctggatcttgattctctcaataac
ctcagacctgtatatggtctgatctttcttttcaaatggcaagctggggaaaaagatgat
cgcccaacaatccaggatcaagtttcgaacttatttttcgcaaatcaggtcattaacaat
gcgtgtgcaacccaagcgattctggctatcctcttgaactctccagaggttgacatcggg
cctgaactatcagcgcttaaagaattcagcaagaactttccatctgaccttaagggtttg
gctatcaataacagtgaggcaattaggactgctcacaacagtttcgcaaggcctgagcca
ttcgtcccagaggaacagaaatctgctacaaaagatgatgacgtataccatttcataagc
tacatacctgtggatggagtcttgtacgagcttgatggactcaaggaaggacctatcagc
cttggtccatgcccaggagaccaaagtggtattgagtggctgcaaatggttcaaccagtg
atccaagaacgaattgagaggtactcacagagcgagattaggttcaatcttttggctgtc
attaaaaacaggaaggatatctacacagcagaactcaaggatcttcaaaggcaaagggaa
cagctattgcagcaggctaatggtatggacaaaactgaagcagaaacacttaacccgttg
attgaagaggtgagtattgggattgaggctgtgagtgataagattataatggaggaagag
aagttcatgaaatggaaaacagagaacattaggaggaagcataactacattccgtttttg
ttcaacttcctcaaacttctcgccgagaagaaacagttgaaacctcttatcgagaaggcc
atgaaacagaaaacagaaagctccacttga
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