Capsella rubella (pink shepherd's-purse): 17897271
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Entry
17897271 CDS
T02984
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17897271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17897271
04147 Exosome [BR:
crb04147
]
17897271
04090 CD molecules [BR:
crb04090
]
17897271
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17897271
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17897271
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17897271
CD molecules [BR:
crb04090
]
Proteins
17897271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_25
SbcC_Walker_B
nSTAND1
DUF815
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
17897271
NCBI-ProteinID:
XP_006303137
UniProt:
R0ICY7
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MNRDGAGEGDSVSHEPSTSKSPKEGEEEETKKEKNDEKTKTVPFYKLFAFADSVDVFLMI
CGSIGAIGNGVCLPLMTLLFGDLIDSFGKNQNSEDIVDVVSKVCLKFVYLGLGTLGAAFL
QVACWMITGERQAARIRSTYLKTILRQDIGFFDVETNTGEVVGRMSGDTVLIQDAMGEKV
GKFIQLISTFVGGFVLAFIKGWLLTLVMLTSIPLLAMAGAAMALIVTRASSRGQAAYAKA
ATVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYKSSIQQGFSTGLGLGIMFFVFFSSY
ALAIWFGGKMIIEKGYTGGAVINVIIIVVAGSMSLGQTSPCVTAFAAGQAAAYKMFETIK
RKPLIDAYDVNGKVPEDIRGDIELKDVHFSYPARPDEDIFHGFSLFIPSGATAALVGESG
SGKSTVISLIERFYDPKAGEVLIDGVNLKEFQLKWIRSKIGLVSQEPVLFTSSIMENIAY
GKENATLQEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPR
ILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKG
SHSELLKDFEGAYSQLIRLQEINKGQDAKPSDISSGSSFRNSNLKKSMEGSVISGGNSSV
GNSSRHHSLNVLGLSAGLDLGNTSQRVVGHEETGTAGQEPPPKVSLSRIAALNKPEIPVL
LLGTVAAAINGTIFPLFGILISRVIEAFFKPADQLKKDSRFWAIIYVALGVTSLIVSPTQ
MYLFAVAGGKLIQRIRSMCFEKAVHMEVSWFDEPQNSSGTMGARLSADAALIRALVGDAL
SLAVQNAASAASGLIIAFTASWELALIILVMLPLIGINGFVQVKFMKGFSADAKSKYEEA
SQVANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGFSFFILFCVY
ATSFYAGARLVEDGKITFNDVFQVFFALTMAAIGVSQSSSLAPDSSKAKVAAASIFAIID
RKSKIDSSDESGTVLENVKGDIELRHLRFTYPARPDIQIFRDLCLTIRAGKTVALVGESG
SGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIRANIAY
GKGSENAATESEIIAAAELANAHKFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVK
EPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIA
EKGTHETLIKIDGGVYASLVQLHMTASN
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgacggcgccggagaaggggactctgtttcacacgaaccttcaacttcgaaa
agtcctaaagaaggagaagaagaagagactaagaaagaaaaaaacgatgaaaagaccaag
acagttcctttctacaagctatttgcgtttgcagattcagttgatgtgttcttgatgatc
tgcggctcaatcggagctattggtaatggtgtttgtttacctctcatgacattgttgttc
ggtgatctcattgattcgttcggaaagaatcagaatagcgaagacattgttgatgttgtc
tcaaaggtttgtcttaaattcgtttaccttggacttggaacactaggagctgcgtttctt
caggtggcttgttggatgatcacaggagaaagacaagcggcgaggatcagaagtacatat
ctgaaaactatccttagacaagacattggattcttcgatgtcgaaacaaacacaggagag
gttgttggtagaatgtctggagatactgttcttatacaagatgccatgggtgagaaggtt
gggaagttcattcagctgatatctactttcgtgggaggatttgttttagctttcattaaa
ggatggttactaacattggttatgttaacttcgattcctcttcttgccatggctggtgct
gccatggcacttatagtcactcgagcttcttctaggggacaagctgcttatgcaaaagca
gcaactgttgttgaacagacaattgggtctatcagaacggttgcttcttttactggagag
aagcaagctattaacagctacaagaagtttataacctcggcgtataaatcaagcattcaa
caaggtttctccaccggtttaggacttggaataatgttctttgtgttttttagcagctat
gctttggctatttggtttggtgggaagatgataattgaaaaagggtataccggtggcgct
gtgatcaacgtgatcatcattgtggttgcgggttcaatgtcgcttgggcaaacatctcca
tgtgtaaccgcatttgccgcgggtcaagctgcagcatataagatgtttgagacgatcaaa
agaaagcctttgattgatgcttacgacgtaaatggaaaggttcctgaagatatccgagga
gacattgaacttaaagatgtgcatttcagctacccggcgaggccagacgaggatatattc
cacggattctctctgtttatcccgagcggtgcaacagcagcactagtaggagaaagtgga
agtggaaaatctaccgtgatcagtttgattgagaggttttatgatccgaaagccggagag
gtactcattgatggagttaatcttaaagagtttcagttgaaatggatcagaagcaaaatc
ggattggtcagccaagaaccagttctgtttacatcgagcatcatggagaatatcgcctac
gggaaagaaaatgcgacgcttcaagagattaaagcagcaaccgagctagcaaatgcggca
aagtttatagataagttacctcaagggttggatacaatggtaggagagcacgggacgcag
ctctcgggaggacagaaacagaggatagcgattgcgagagctattcttaaagatccgcgg
attttgctgctggatgaagcaacaagcgcgctcgatgcagaatctgaaagagtggttcaa
gaggctttagatagagtgatggttaaccggactacggtaattgtcgcgcataggttaagc
acggtcagaaatgctgatatgattgcggtaattcaccgcgggaaaatggtggaaaaaggt
tcgcactccgagctgttaaaagacttcgagggagcttattcgcagctcattcggttacaa
gagataaacaagggccaagatgcaaaaccatcagatatatcttccggatcgtctttccgg
aattcgaacttgaaaaaatcaatggagggatctgttattagtggcgggaactcgtcggtt
ggaaatagcagccgtcatcattctttgaatgttcttggtttatctgcaggactagacctt
ggtaacaccagccaacgagtagtaggccatgaggaaacgggaacagcgggtcaagaacca
cccccaaaagtatcactttcccgaatcgcagctttaaacaaacctgagatcccggttctc
cttctaggaaccgttgcagcggcaatcaatggcacgattttcccgctttttgggattttg
atttcaagagtcatcgaagcgttcttcaaaccagctgaccagttaaagaaagattcaaga
ttctgggcgatcatatatgtagctcttggagtaacctcgttgatcgtctcaccgactcaa
atgtatctgtttgcagtagctggaggaaaactgattcagcgaattcgatcaatgtgtttt
gagaaagcggttcacatggaagttagctggttcgatgagccacagaactcgagtggtacc
atgggtgcaaggctatctgctgatgcagctttgattagggctctagttggagatgcatta
tctctagctgttcaaaacgctgcatctgctgcttctggattgattattgctttcactgcg
agttgggaattggcgcttataatcttggtgatgcttccacttattggtatcaatggtttt
gttcaagtcaagttcatgaaaggattcagcgctgacgccaagtcaaagtacgaggaggcg
agtcaggtagcaaatgatgctgtgggtagtataagaactgttgcgtctttctgcgcagag
gagaaagtgatgcagatgtataagaagcaatgcgaaggtccgattaaagacggaataaag
caaggtttcatcagtggattagggtttggattctccttttttattctgttctgtgtctac
gcgacaagcttttacgctggagctagattggttgaggacggcaagattactttcaatgat
gttttccaggtgttctttgcgttgacaatggcagcgattggtgtctcccagtcgagttct
ttagctccagattcgagcaaagccaaagttgcagctgcttcgatctttgcaatcatcgat
agaaaatcaaagatagactcgagcgatgagtcaggtacagtgttggagaatgttaaggga
gatattgagcttcgtcacttaaggttcacttatccagcaagaccagacattcaaatcttc
cgcgatctttgcttaaccattcgtgcaggaaagacggttgctttggtaggagaaagcggg
tcgggaaaatctactgtgatctcgctattacaaagattttacgatcctgattccggtcat
ataaccctagatggagttgagctgaagaagctacagttgaaatggttgagacaacaaatg
ggacttgtgggacaagaacctgtcttgttcaacgacacgattagggccaacattgcttat
ggaaaaggaagcgagaacgctgcaacagagtctgagatcatagcagctgcagaactcgcc
aatgcacacaaattcatctctagcatacaacagggttacgacacagtggtgggagagaga
gggattcaattatcaggaggacaaaaacagcgcgtggctatagcacgtgccatcgtgaaa
gagccgaagatactgcttttggacgaagcaacgagcgctcttgatgcggaatcagagcgc
gtggtccaagatgcgcttgaccgagtgatggtgaaccgaaccacgatcgtcgtggctcac
cggttatcaacaattaaaaacgctgacgtcatcgccgtcgttaagaacggtgtgatcgct
gagaaaggtactcacgagacgttgatcaaaatcgacggtggtgtttatgcttcgctagtt
cagcttcacatgactgcttcaaattaa
DBGET
integrated database retrieval system
