Capsella rubella (pink shepherd's-purse): 17899016
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Entry
17899016 CDS
T02984
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17899016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17899016
04147 Exosome [BR:
crb04147
]
17899016
04090 CD molecules [BR:
crb04090
]
17899016
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17899016
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17899016
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17899016
CD molecules [BR:
crb04090
]
Proteins
17899016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
AAA_21
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_30
AAA_7
AAA
nSTAND1
AAA_24
P-loop_TraG
DEAD
Cytidylate_kin
AAA_23
AAA_15
Mg_chelatase
APS_kinase
DUF87
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
17899016
NCBI-ProteinID:
XP_023632828
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MDNIEPSSSGNIQAETEAKKDEKKKMKKESVSLMGLFSAADKLDYFLMLLGGLGACIHGA
TLPLFFVFFGKMLDSLGNLSTDPKTISSRVSQNALYLVYLGLVNLVSAWIGVSCWMQTGE
RQTARLRINYLKSILAKDITFFDTEARDSNLIYHISSDAILVQDAIGDKTDHVLRYLSQF
IAGFVIGFLSVWQLTLLTLAVVPLIAIAGGGYAIIMSTISEKSEAAYADAGKVAEEVMSQ
VRTVYAFVGEEKAVKSYSKSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALLLWYASLL
VRHGKTNGGKAFTTILNVIFSGFALGQAAPSLSAITKGRVAAANIFRMIGNNDLDRSERL
EIGTTLENVAGKIEFHQVSFAYPSRPNMVFENLSFTIRSGKTFAFVGPSGSGKSTIISMV
QRFYEPTSGEILLDGNDIKSLKLKWLREQMGLVSQEQALFSTTIASNILLGKENATMVQI
IEAAKAANADSFIKSLPNGYSTQVGEGGTQLSGGQKQRLAIARAVLRNPKILLLDEATSA
LDAESEKIVQQALDNIMDKRTTIVVAHRLSTVRNVDKIVVLRNGQVMETGSHSELISRGG
EYATLVNCQETEPQENSRSIMSETCKSQDGSFSSRRVSSSRRTSSFREDQEKTKAGSTGE
DLGSSSMIWELIKLNAPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPSPSLIKH
DVEKVALIFVGAGIATAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENN
TGSLTSILAADATLVRSSLADRLSTIVQNLSLTITALALAFYYSWRVAAIVTACFPLLIA
ASLTEQLFLKGFGGDYTRAYSKATSVAREAIANIRTVAAFGAEKQISEQFTSELSKPTKN
AFVRGHISGFGYGLTQFLAFCSYALGLWYVSVLIKHKETNFGESIKSFMVLIVTAFSVSE
TLALTPDIVKGTQALGSVFRVLHRETEIPPNQSNSRMVTHIKGDIEFRHVSFAYPTRPEI
NIFQNLNLRVSAGKSLAVVGPSGSGKSTVIALIMRFYDPDNGNLCIDGQDIKTLNLLSLR
KKIALVQQEPALFSTTIHENIKYGNEKASEAEIIEAAKAANAHEFISRMEEGYKTHVGDK
GVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAH
RLSTIRKADTIAVLHRGRVVEKGSHRELVSIPNGFYKQLTSLQEVV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatagaaccatcttctagtggaaacatccaagctgagacggaagcaaagaag
gatgagaagaaaaagatgaagaaagaatcagtgtccttgatgggtttgtttagcgcagcg
gataaacttgattacttcctgatgttgcttggtggtttaggcgcctgtattcatggcgct
acacttcctctcttcttcgtcttctttggcaaaatgctagattctcttggaaacctttct
acagatcctaaaaccatatcttctcgtgtttcacagaacgctctgtacttggtctactta
ggactggtcaatctggtatcagcttggataggagtttcttgttggatgcaaacaggggaa
agacaaacagcgcgattacgtataaactatctcaaatcaatcttagcaaaagatattact
ttctttgatacagaagctagagattcaaatctcatttatcacatctcaagtgacgcaatc
ttggttcaagatgcaattggcgataagacagaccatgttttgcgttatttatctcagttc
atcgcaggatttgtcatcggttttttgtcggtatggcaactaacgctgctcacgttagca
gtggttccattgatagcaattgcaggaggaggatatgccataatcatgtccacaatctca
gagaagagtgaagctgcttatgctgatgcaggcaaagtcgcagaagaggttatgtcacag
gtgagaacagtgtatgcatttgtaggagaagagaaagctgtaaaatcttactcaaagtct
ctcaagaaagctctgaaacttggtaaaaggagtggtcttgctaaaggcttaggggttgga
ttaacatatagcctcttattctgtgcttgggctctgcttttgtggtatgcaagtcttctt
gtacgccacggtaaaaccaacggtggaaaagccttcacaacgatcctcaatgtcattttc
agcggattcgccttaggtcaggccgcaccaagcttatccgctattaccaaaggaagagtt
gctgctgcaaatatattcagaatgatagggaacaacgatcttgataggtctgagagatta
gaaattggaacaacattggaaaatgtagctgggaagattgagtttcatcaagtgtctttc
gcatacccttctagaccaaacatggtttttgagaatcttagtttcacaatacgttcaggc
aagacttttgcatttgttggtccaagtggttcagggaaaagcacaatcatatcaatggtg
cagcgtttctatgaacctacctcaggggaaattctcttggatggaaatgacatcaagagc
ttgaaactcaagtggttaagagaacagatgggattagtgagtcaagaacaggctttattc
tccacaactatagcttccaacattcttcttggtaaagagaatgcaactatggttcagatc
atagaagctgctaaagcagctaatgcagattcttttattaaatcattacccaatggttac
agtactcaggttggagaaggaggaactcagctctcaggaggacagaaacaaaggcttgca
attgctcgagcggttctaagaaacccgaagatattacttttagatgaagcaacaagcgcg
cttgatgccgaatcagagaagattgttcagcaagcacttgacaacattatggacaagaga
acaacaattgtcgttgcacatagattatccaccgttcgaaatgttgacaagattgttgta
ctgagaaatggccaggtaatggaaactggtagccactcagaacttatatcaagaggagga
gaatacgcaactcttgtgaattgccaagagaccgaacctcaagagaactcgagatcaatt
atgtctgaaacttgtaaatcacaagatggatcttttagttcaagaagagtatctagctca
aggaggacttcaagcttcagggaagaccaagagaagactaaagcaggttcaaccggggaa
gatttaggctcatcttcgatgatatgggaactgataaagctgaatgctccagagtggcct
tatgcattacttggctcaatcggtgcagttcttgctggagcacaaactccattgttctct
atggggattgcttatgtgctaactgcattttattcgccttctcctagtttgataaagcac
gatgtagaaaaagtagctcttatctttgttggagctggaatagcaacagctcctatatat
ctcctccaacattacttctatacacttatgggagagcgtcttacttctcgggttcgctta
tcattgttttcagcgattctttcgaatgagattgggtggtttgatttggatgagaacaac
actggctcactcacttcaatcttagctgctgatgcaactttggtgagaagttctctagcg
gatcgtctctcgacaatagtccaaaacctatctcttacaatcacagcattagcacttgca
ttctactatagttggcgtgttgctgctattgtaacagcttgtttccctcttctcattgcc
gcttcacttacagagcaactatttctaaaaggctttggaggagactacacaagggcttat
tctaaagcaacttcagtggcgcgtgaagcgattgcaaatataagaactgtcgctgcgttt
ggtgctgaaaagcaaatctcagaacagtttaccagtgagctaagtaagcccaccaagaat
gcctttgtaagaggtcatatctctggatttggatacggtttgactcagtttctcgcgttc
tgttcttacgctcttggtctctggtacgtatcggttttgattaagcacaaggagacgaat
tttggggaaagtatcaaatccttcatggtgttgatcgtcacagctttttcagtttctgaa
acgcttgctttgaccccagatatcgtgaaaggcacgcaagcacttgggtcggtttttagg
gttttacatagagagactgagatacctccaaaccaatctaactcgagaatggtcactcat
atcaaaggagatatagagtttagacatgtgagctttgcgtatcccacgagacctgaaatc
aacatttttcaaaatctaaacctccgagtttcagcggggaagagtcttgcggtcgtggga
cctagtggctcaggcaagagcacggtgatcgctctgatcatgagattctacgatccggac
aacggaaatctctgcatcgatgggcaagacataaaaaccctaaacctacttagcttgcgc
aagaagatagcgttagtccaacaagaaccggctctgttttcaacaaccatacacgagaac
ataaaatatgggaacgagaaggcatcagaggcagagattatcgaagcagcaaaagccgcg
aacgcacacgagtttataagcaggatggaagaagggtacaagacgcacgtaggtgataaa
ggggttcaattatcaggtggtcaaaaacagagagtagctatcgcgagggcagttctaaag
gatccttcagtgcttctccttgacgaggcaacaagtgctttagacacgagctcagagaaa
ctagtccaagaagcgctagacaagctgatgaagggacgaacaactgtattagtggctcat
aggctctcgaccataagaaaagcagacacgatcgccgttttgcataggggaagagttgtg
gagaaaggaagccatagagaacttgtttccatacctaatgggttttataagcaattgact
agtcttcaagaagtggtgtga
DBGET
integrated database retrieval system
