Capsella rubella (pink shepherd's-purse): 17899124
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Entry
17899124 CDS
T02984
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00280
Valine, leucine and isoleucine degradation
crb01100
Metabolic pathways
Module
crb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
17899124
Enzymes [BR:
crb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
17899124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_4
ATPgrasp_TupA
POTRA_TamA_1
Motif
Other DBs
NCBI-GeneID:
17899124
NCBI-ProteinID:
XP_006306852
UniProt:
R0IM94
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MSMMTVWALRRNVRRKSSSMLVRYNSGSASFGGASIKPKERCIEKILVANRGEIACRIMR
TAKRLGIQTVAVYSDADKDSLHVKSADEAVRIGPPSARLSYLSGATIMEAAARTGAQAIH
PGYGFLSESSDFAQLCQDSGLSFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGHEQ
DIDHMKSEAEKIGYPIIIKPTHGGGGKGMRIVQSEKDFADSFLGAQREAAASFGVNTILL
EKYITRPRHIEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNISEKFRTNLGQAA
VSAARAVGYYNAGTVEFIVDTESDQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANG
EPLPISQSEVPISGHAFEARIYAENVPKGFLPATGVLNHYRPVAVSPSVRVETGVEQGDI
VSMHYDPMIAKLVVWGGNRGEALVKLKDCLSNFQVAGVPTNINFLQKLASHKEFAVGNVE
THFIEHHRSDLFADESNPAAEEVAYKAVKHSAALVAACVSTIEHSAWNESNQGNLPSIWY
SHPPFRVHHESKQTIELEWNNECKGTGSHLLSLYLIYQPDGSYLIQEGNDSPSLEVRVTR
LGKCDFRVEEAGLSMNVSLATYLKEGYKHIHIWHGSEHHQFKQKVGIEFSEDEEGVQHRT
SSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPVLVLEAMKMEHVVKAPSSGSIQDL
KVKAGQQVSDGSALFRIKGIIT
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgatgacggtgtgggcgctccggcggaatgttcgccggaaaagttcctcaatg
ctcgtgagatataactccggctccgcgtctttcggaggagcttcgattaagcctaaggag
cggtgtatcgagaagattttggtggcgaacagaggcgagattgcttgccggatcatgagg
acggcgaagcgtttagggattcagaccgttgctgtttacagtgacgctgataaagattcg
ctccatgtgaagtctgccgacgaagcggtacggattggtccgccctcggctcggctcagt
tacctcagtggtgcgactatcatggaggcagcggctcggactggtgcgcaggcgatacac
cctggatatgggttcttatcagaaagttccgactttgctcaactctgtcaagactctggt
ttatcattcattggacctccagcatctgctattagagacatgggtgataaaagtgcatct
aagagaataatgggggctgctggagttcctctcgtgcctggatatcatggccatgagcaa
gatattgatcatatgaagtcagaagccgaaaagattggataccctataataatcaagcca
acacatggaggtggggggaagggaatgaggatagtgcaaagtgagaaggattttgctgac
tcgtttttaggggctcaacgtgaagctgctgcttcttttggcgttaacactattcttctt
gagaaatacatcactcgaccaaggcatatagaagtccagatatttggtgacaaacatgga
aatgttcttcatctatacgaaagggattgcagtgtgcaaagaagacaccagaagattatc
gaagaagcccctgcgcctaatatatctgaaaagttccgcacaaacttaggccaagctgct
gtctctgcggcacgggcagttggatattacaatgctgggacggtggaatttatagttgac
acagagtctgaccaattttattttatggaaatgaacacccgtctacaggtcgaacatcct
gtaactgagatgattgttggtcaagatcttgtggaatggcaaattcgggttgccaatgga
gaacctctccccataagccagtctgaggtgccaatttcaggtcatgcctttgaggccagg
atatatgctgaaaatgttccaaaaggatttcttcctgcaactggggtccttaatcattat
cgccctgttgcagtctcaccatcagttcgggttgaaactggagttgagcaaggagacatt
gttagcatgcactatgatcctatgattgcaaagcttgttgtctggggaggtaatcgtggc
gaagctctagtgaaattgaaggattgcttgtctaactttcaggtagcaggtgtacctaca
aacattaatttccttcaaaaacttgctagtcataaggagtttgcagtgggaaatgtagaa
actcattttattgagcaccatagaagtgatctgtttgctgatgaaagcaatccagctgca
gaagaagtggcatacaaggcagttaagcatagtgcagcattggttgctgcttgtgtctcc
acaatcgagcattctgcttggaatgaaagtaatcaggggaatctcccatcgatatggtat
tctcatcctccttttagggtccatcatgaatccaaacaaaccattgagctagagtggaat
aatgaatgcaagggaactggttctcacctcttatcactctatttaatatatcaaccagat
ggaagctatctcattcaggaaggcaatgattctccaagtttagaagtcagggtaactcga
ttaggaaagtgcgattttagagttgaagaggctggattgagcatgaatgttagtctagcc
acgtacttgaaggagggttataaacacatccatatatggcacggttcagaacaccatcaa
ttcaagcagaaggtaggaatcgaattctctgaagatgaagaaggtgttcaacacagaacg
agctccgaaacatcatcacaccctccaggaaccattgtggcccccatggctggattagta
gtcaaggtccttgtcgaaaacgaagccaaagtagatcaaggccaacctgtattagtccta
gaggcaatgaagatggagcacgttgtgaaagccccatcctctggaagcatacaggacctc
aaagttaaagcaggccaacaggtttcagatggtagtgctctattcaggatcaaaggaata
ataacatga
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