Chlamydomonas reinhardtii: CHLRE_01g024400v5
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Entry
CHLRE_01g024400v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K20305
trafficking protein particle complex subunit 8
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cre04131
]
CHLRE_01g024400v5
Membrane trafficking [BR:
cre04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
CHLRE_01g024400v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
5715260
NCBI-ProteinID:
XP_042928445
LinkDB
All DBs
Position
1:3774153..3783474
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AA seq
1695 aa
AA seq
DB search
MVDIRPWLQELYAPAVLVASTPAAEALIQSKNGLGLVDLLRPYASAFGLNVPVRVGETSV
RVQDLRVRFFDVATLYQPPPEVIEEHLQEVLKVSSQRSAKLDPSPDLLQRFMSDNPPDMR
ELTPWFEAYRSEFMRLLRFGDHETLDYPVACVYAIPADVQNPASHFDTLVAQLAPPPLMQ
QDVMYTLRDKDFPRHYLLLLDSSTGMNEKRAMDNLTAIRRLYGEAHCSILRINSGNGDRA
HSGAPVDFFARYQFTCLSSGGAGEPRLRPPPPPGGVGAYLTVQDLDSVGGFVREFLCRTL
LPKLEDRIARLNASITAARRGLRNRLNRFWKGAAEDRQTDRPYPWHSVEGQMRQLGDLAF
LMRQYPFAESTYRLAAQDYQAEGNSKWYAGVEEMIGLCSVLGEPVDPIAAVLLQNDPMKY
FMRAYEHYTKPPAAVLAAAAPPGSGGSAVGAPGSGPPLPPAALAASKIGRMLATRVVMLG
AAVQCAAGRYRAASDALMRAQSEEENARAGLLLEQSAYCMLYIRPPLVRKFAFQMVLAGI
RYICCGQKRIAIHAYRQVLAQYLGRRWKYIEEHLHAVLGAQCVEYGDKDRALWHYCALLD
CGHRPAAQQQHNVGQFLNLLAGVRDQLAIAHDGVSLVDSLPLPLVNRHDVRVLCSDTACY
SGPAARAVPESSWLKMEACCTSGSNNWLVEGGGAKQERDHEEYTMCVSGEEVGVQVEFRN
PLAVKLKVSNVRLICNFTHESDPSAAGKGPVAIPDSSNTSTFAATGASSSSQSSNPLADG
SHPLLPGAAPPAISTQPGSEYLHVAEAQFTLHPGEALVEVLKVLPRAPGWLRITGVTWTL
NGTAHGRITFDVKGRRRKKPKGERPGQLKHFPPHRRLLFQVVPAMPRLELLGDPLPPALY
SGELCRVLMRIRNSGGLPLRSLALVVGHPEAVVPATDANKDRPLLDSLTDHREVVQLSKV
PASARGTLQLYRLWPGRELAPGEVLEWPLWLHPRGQGTLKLPIVWYGEPAAPKSGMRHRT
LRICGSVSVQPLLSARPVVWPSPTHLSQYLLRLGVDNSKDAERVVLQQLAAVTVPPLPPH
HVAGASGVDTPATPTNTPRPVPVGWRMSMLGDTVGAPASSAASTAGLPGNATPDGAPSTT
GASAAAARSLPLAVPLQPGESAGLFLQLLAPPPAAQQLRQAVGSSASVAATGGMSGVTGG
AGTGISQPPSGLATPGRADDPSAVAARAVAQAAEAVRSLALAEGGANGAGPTGRASPYVD
GSDSGLQQLNLFGPGVLAHFYRRGRRGMVAATPSLGAAAATTPGGLPQQRTGGVATPGMA
TLQQPLLPGGLPPALGQSVSFSPQTQGVGAPGGPMRGASFGPTNTTAAGGFQGPGPLGPV
GPGRPAMPPGAIGPGGGGMVPAGQGQAAVAAVGPGRPGPPLMLADPPLDLLLLWHVASSQ
RTGAHQGRQRLGLCRPYDPQSNRDLSGCIQAHTTPVRMLLTGPNGASSAASATGSAGPVV
RHDFRRSPLAVLPLRLLVRNNTALEARLQIEVGEGWNSNDAPHSWQASTSLLGTSHAVAP
VGAPGSLGQPGVGAAGPSPVSAGPTGGNGPLGQSVMAGAPGGGGGAGGGGMGSSMMAITY
QAGLPPCPEYTWVGPSFVSVPRVQPGGEAEVTLAVSVFRPGAYSISGYRCTAFLEATGAV
EVQRGEPLCFRVEGA
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggtggatattcggccttggttgcaggagctgtatgctcctgcagtgctcgttgcatcc
actccagctgcagaggctctcatacaaagcaaaaatggactcgggctggttgacctgctc
cgcccctacgctagcgcgtttgggctcaatgtgcctgtacgggttggggagacatccgtg
cgcgttcaggacctgcgcgtgcgcttcttcgacgtggcgacgctgtatcagccaccgccg
gaggtgattgaggagcacctgcaggaggtgctcaaggtgtcctcgcagcgcagcgccaag
ctggacccctccccggacctgctgcaacgcttcatgtcggacaacccgcccgacatgcgg
gagctgacgccgtggttcgaggcgtaccgctcggagttcatgcgcctgttgcgcttcggc
gaccatgagacgcttgactaccccgtggcatgcgtgtacgccatcccggcggacgtgcag
aaccccgcctcgcactttgacacgctggtggcgcagctggcgccgccgccgctgatgcag
caggacgtgatgtacacactgcgtgacaaggacttcccgcgccactaccttctgctgctg
gactcgtccaccggcatgaacgaaaagagggccatggacaacctgacagcaatacggcgg
ctgtacggggaggcgcactgctccatcctgcgcatcaactcgggcaacggcgaccgagcg
cacagcggcgcaccagtggacttcttcgcgcgctaccagttcacatgcctctccagcggc
ggcgcgggcgagccgcggctgaggccgccgccgcccccgggcggcgtcggcgcctacctg
accgtgcaggacctggactctgtgggcggcttcgtgcgcgagttcttgtgccgcaccctg
ctacccaagctggaggaccgcattgcgcgcctcaacgcctccatcaccgccgcgcgccgc
ggcctgcgcaaccggctgaaccgattctggaagggggccgccgaggaccgccagacggac
aggccgtacccgtggcacagcgtggagggccagatgcggcagcttggcgacctggccttc
ctcatgcgccagtaccccttcgccgagtccacctacagactggcggcgcaggactaccag
gcggagggcaacagcaaatggtacgccggcgtggaggagatgattgggctgtgcagcgtg
ctgggcgagccggtggaccccatcgcggctgtgctgctccaaaacgaccccatgaaatac
ttcatgcgggcgtatgagcactacaccaagccgccggccgccgtgctggctgccgccgcg
ccgcccggctctggcggcagcgccgtcggcgcccccggctcgggcccgccgctgccacct
gcggcgctggcagcctccaagatcggtcgcatgctggccacgcgggtggtaatgctgggc
gcggcggtgcaatgcgcggcggggcggtaccgcgccgccagcgacgcgctcatgcgtgcg
cagtcggaggaggagaacgcgcgggcggggctgctgctggagcagtcggcctactgcatg
ttgtacatccggcctccgctggtgcgcaagttcgcgttccagatggtgctggcgggcatc
cgctacatctgctgcggccagaagcgcatcgccatccacgcctaccgccaggtgctggcg
cagtaccttggccgccgctggaagtacatagaggagcacttgcacgccgtgctgggcgcg
cagtgcgtcgagtatggtgacaaggaccgggcgctgtggcactactgcgcgctgctggac
tgcgggcaccggccggcggcgcagcagcagcacaatgtcggccagttcctcaacctgctg
gcaggcgtgcgggaccagctggccattgcacacgacggcgtgagcctggtggacagcctg
ccgctgccgctggtgaaccgccacgacgtgcgggtgctgtgcagcgacaccgcgtgctac
tctggccccgcggcgagggcggtgcccgagagctcgtggctcaagatggaggcctgctgc
accagcggctccaacaattggctggtggagggcggcggcgccaagcaggagcgggaccac
gaggagtacaccatgtgtgtgagcggcgaggaggtgggcgtgcaggtggagttccgcaac
cccctggccgtcaagctcaaggtgtccaacgtgcgcctcatctgcaacttcacgcacgaa
agcgaccccagcgcagccggcaaaggccccgtggctatcccggacagcagcaacacctcc
accttcgcagcgaccggcgccagcagcagcagccaaagcagcaacccgctggcggacggc
tcgcacccgctgttgccgggcgcggcgccgccggccattagcacgcagccgggcagcgaa
tacctacatgtggccgaggcccagttcacgctgcacccgggcgaggcactggtggaggtg
ctcaaggtgctgccgcgtgcgccgggctggctgcgcatcacgggcgtgacgtggacgcta
aacggcaccgcgcacggccgcatcacctttgacgtgaagggccgccgtcggaagaagccc
aagggcgaacggcccgggcagctgaaacacttcccgccgcaccggcggctgctgttccag
gtggtgccggccatgccgcgcctggagctgctgggcgacccgctgccgccggcgttgtac
tctggcgagctttgcagggtgctcatgcgcatccgtaactcgggcgggctgccgctgcgg
tctctggcgctggtggtggggcaccccgaggcggtggtgccggccactgacgccaacaag
gaccgaccgctgctggacagcctcacggaccaccgcgaggtggtgcagctgagcaaggtg
cccgccagcgcgcgtggcaccctgcagctgtaccgcctgtggccgggacgcgagctggcg
ccgggtgaggtgctggagtggccgctgtggctgcacccgcggggccagggcacactcaag
ctgcccatcgtatggtacggcgagccggcggcgcccaagagtggcatgcggcaccgcacg
ctgcgcatctgcggcagcgtatcagtgcagccgctgctgagcgcgcggccggtggtgtgg
ccatcgcccacgcacttgtcgcagtacctgctgcgcttgggcgtggacaacagcaaggac
gcggagcgtgtggtgttgcagcagctggcggcggtgacggtgccgccgctgccgccacac
cacgtggctggcgcctcgggcgtcgacacacctgccacgcccaccaacacgccgcggccg
gtgccggtgggctggcgcatgagcatgctgggtgacaccgtgggcgcgcccgccagctcc
gccgcctccaccgccggccttcccggcaacgccacgcctgatggcgcgccctcgacgaca
ggcgcctccgcggctgccgcccggagcctgccgctggcagtgccgctgcagcccggcgag
tcagcagggctgttcctgcagctgctggcgccgccgccggctgcgcagcagctgcgtcag
gcggtgggctcatcagcatcagtagcggcgacaggcggcatgtcgggcgtgacgggcggc
gccggcactggcatcagccaaccgcccagcggcctggcgacgcctgggcgagcagacgac
ccgtcggcggtggcggcacgcgcggtggcgcaggctgcggaggctgtgcgctcgttagcg
ctggcggagggcggtgctaatggtgcagggccgactggccgggcatcaccgtacgtggac
ggctcagactcggggctgcagcaactgaacctgtttggccccggcgtgttggcgcacttc
tatcgccgcgggcgcaggggcatggtggcggcaacgcccagcctgggtgcagcagcggcc
acgacaccgggtgggctgccgcagcagcgcacaggcggcgtggcgacgcccggcatggcg
acgttgcagcagccgttgctgcccggcgggctgccgccggcgctgggccagtccgtcagc
ttcagccctcagacgcaaggtgtgggtgctccgggcggccccatgcgcggggcgtccttc
ggccccacaaacaccactgcggccggtgggtttcaggggcctggacctctgggcccagtg
ggccccggccggccagcgatgccgccgggtgctatcggcccaggaggcggagggatggtg
ccggcggggcaggggcaggcggcggtggcggcggtgggcccgggccggcctgggccacca
ctgatgttggcggacccgcctcttgacctgctgctgttgtggcacgtggcgtccagccag
cgcacgggggcgcaccagggccggcagcggctggggctgtgccgcccctacgacccgcag
tccaaccgcgacctgtcgggctgcattcaggcgcataccacgccggtgcgcatgctgctg
accggccccaacggtgctagcagcgcggccagcgccacgggctcggcgggccccgtggtg
cggcacgatttccggcgcagcccgctggcggtgctgccgctgcggctactggttcgcaac
aacactgcgctggaggcacggttgcagatcgaggtcggcgagggctggaactccaacgac
gctccgcacagctggcaggcttccaccagcctgctgggcaccagccacgcagttgcgccc
gtcggggcccctggcagcctggggcagcccggcgtgggcgctgccgggcccagcccggtc
agtgcgggccccaccggcggcaatggaccgctggggcagtcggtgatggcaggggcgccg
ggcggcggcggtggcgcgggcggcggcggcatgggcagcagcatgatggccatcacgtac
caggcggggctgccgccttgccctgaatacacctgggtggggccgtcgttcgtgtcagtg
ccgcgcgtgcaacccggcggcgaggcggaggtgacgctggcggtgtctgtattccggccg
ggcgcctacagcatcagcggctaccgctgcaccgccttcctggaggcgaccggcgcggtg
gaggtgcagcgcggcgagccgctgtgcttccgggtggagggcgcctag
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