Chlamydomonas reinhardtii: CHLRE_02g075600v5
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Entry
CHLRE_02g075600v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
Organism
cre
Chlamydomonas reinhardtii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
5727199
NCBI-ProteinID:
XP_042926777
LinkDB
All DBs
Position
2:338610..353841
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AA seq
2129 aa
AA seq
DB search
MSNVTSALAACAPSSILSITAANACTAAVPTLSAAARLITKPGTALGSGTCQADARDVAA
LLAHRAHSTARAAVGGGAEEAPREGSAVAGGSSSDQRLVANVSGARQQASCTANAAPVET
QGLTAAGACGSLPAPPPIFNETQLRSVATATSAIAASGRGSSLACRAFGGPNTATSTGGP
AVGGSSFSGRPGGLLWPDRRNRVGHTPQPLAVSDRRGLAAAGGRASLLHALGLLPAAGGV
GAPTALATAMAAAAAPAALPWPAACRAAFASSAHAAVARRRGEELEGGGEGRAAGTGAAG
GAVSSATDTWLPEPLAAAAAGGGGGGSASGGGGSSGGPQSRALQAPAHAYVGRDGPQGLM
EELAAAAAASSSPYIQQALRQLAAGGGGSGGTRAPAGAGAAAPAALKAAAPSNGGRQDSD
SGAASDALLREVLAVAGSVQSRGFRAALQAVVGKEGMPKLKPKPKRVTSTGRKATEPAKA
AGAAAAPATVPAAPAEAAVAPAPAPASGPASAAGALLPEAASGAEGSGASPAPKRRKRQT
ASTASTASAASDTAAAASHEVALAAAVGQDSPGGPGSAAGAVAGKRPRGRPKKDAPPSAA
RVAAAATAAEAAAERAAAAAEEAAAQQAAAERELSSSSSGNGPRPSFGSSVLSPVPPPES
DPRYVSMADADALQPGNSLYVGRLVEWHAAHVDAVLAAPARTPGLPPPSLQDFQLQLNLE
ARCRNLAVEQYRREQEALVARGAVEGALPARRLTEAWLPRLTAALTARFNQFAALQDPAK
QQRRRGSAATSTINLRKGSGSGSGGKGRSYVPLEQALKMMDSVGAGAANKSSDGTDTAAA
AAGASTSTSTAAGAVSSAGGGGGSDGGAGDGGGGGGATASAWAAVAALPPVRLRELAEWV
PMVKSVPPELLARAAVSGMLNSLVLRDSGVAGEGEDMPRGVALAVHVADALGRRVLDMVT
YMEVCAVVHEKRRALARAKQELGAAMGKAAAAAAAGAEGGLEAAAVAGGQGGGEAGAAAA
AAEDSLMMDPVVSEAAAKVRATRAELEALRAAAAALQPAAADGQLLNDGTTAEARRRAAP
LKARGSGLSLEQRAAALGQRTQDQLSAVMDRIGRRVRQDELDGALFAALAGARTAAQRVD
VTRAWQAALSQAADRLQQQLGAGAAEAEIAEAAKGVAAGGAKQRVRKGALEAADGDSGGG
GGGGLTAAQAAELKSRHATLQVALTKAGVQLKAAEEMLAAEEAAAAAAAEEKVKASPRKA
QGRPKKTAAAGSGAAATSPSAAAPVQALDLDQVMAQERDATTATASATAVDTDAAAAGDG
AGLGDALQHLHRSVLRRVVAGTDRAQRPGEWDQSTRVKVGACLLDLMLRLLEVEVEAEAD
EAAEAEAADEEAVGGGGDSGRAGGRQRVMEPALRHSTGAAATFHHGGFQTPGLVMLHPQV
LRQLEGDVALQRLLQPRFMPMVVEPRPWCGTRAGGFLSQTVPVMKTQYSPAVMERLASAH
AAGRMTPLYQALTVLGNVPWRIHGRLLDVMETVQRQGGGRLGLPQNQPQELPTRFTSALN
HVWRPLLGADTPAQCGTPYLRLQREGRRGGQLLVGAGRMSESEEEAYQHQCDAVRLLNRN
ESGLRCALKYRLDVARQYTGRYDLGAGVYQLYGTDVPTAADGAVAAAAAGGGEGGGGGGG
GLLAGSAAGSGRPILFYQPHHVDFRGRAYPLHPHLHHLGDDATRGLLQFGRGRPLGERGF
DWLLMQVANLWGQGVDKRPLAERLEWARQQLPAVRAAAAHPLEGGGTWWQRAEKPWQMLA
TCFEVADALDSSGGVNPTAFISHQPVNQDGTCNGLQHYAALGRDLRGGTAVNLVPADRPQ
DVYQAVADAVAERVELARAQGRSEAAKIHGHVDRKLVKQSVMTYVYGVTFVGARDQIESR
LEERGWGNPKERRKVATYVAGIVFESMSDVFGPAVRVRSWLEDCAKYAVSAGAPVVWTSP
LGFPVEQPYRKVPTLSVHTSLQTFSIRDNSRDAVSPLDVRKQCSGFPPNYVHCLDGAHMM
MTARAVREAGACFAAVHDSYWTHAASVDLMNKAIRDTFVQLHERPLLHELRRELLRNPEY
SGATAALPRVPAPGQLDLSVVRQSTYFFS
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgtaacctcggcacttgccgcgtgcgcaccatcatcaatactctctatcacc
gctgcaaatgcctgcacagcagcagtaccaacgctttctgctgcagcccgactgatcact
aagcccggcacggctcttgggtcaggcacttgtcaagcggatgctcgcgatgtggcggct
ttgctcgctcaccgggcgcactcgacagcgcgcgctgccgtaggtggtggcgctgaagag
gcgcctcgggaagggtccgcggttgccggtggcagcagctcggatcagcgcctcgtggcc
aacgtcagcggtgcacgacagcaggcgtcatgcacggcaaatgctgcaccagtagagaca
caaggtctcaccgccgccggcgcttgtggcagcttgcccgcaccacctcccatttttaat
gagacgcagctgcgcagcgttgccaccgccaccagtgccattgccgccagcggccgcggc
agcagcctggcctgcagagcattcggtggcccaaacaccgccaccagcaccggcgggccc
gcggtgggcggcagtagcttctccggccgcccggggggcctgctgtggccggaccggcgc
aatagggtcggccacacgcctcagccgctagccgtgtctgaccgccggggtctagccgca
gcaggcggccgggcatcgctgctccatgccctcgggctgttgccggcggccggcggcgtc
ggagcaccaacagcactagcaactgcgatggcggcggcagcagctcccgccgcgttgccc
tggcccgcggcgtgtcgcgcggccttcgcctccagcgctcacgccgccgtcgcgcggcgc
cgcggcgaggagttggagggcggaggcgagggtcgggctgctgggaccggcgcggccggc
ggcgctgtcagctcggccactgacacgtggttgccggagcccctggcggcggcagcggcc
ggcggcggcggcggcggcagtgccagtggcggtggcggtagcagcggcggcccgcagtcg
cgtgcgctgcaggcccccgctcatgcatacgtggggcgggacgggccgcaggggctcatg
gaggagctggcggcggcggcggcggcctccagctcgccctacatacagcaggcgctcagg
cagctagccgccggcgggggcggcagcgggggcacgcgggcgccggcaggggcgggcgca
gcggcgccggcagcgcttaaggcagcagcgccttcgaatggggggcgacaggactcggac
tcgggcgcggcgtctgatgcactgctgcgcgaggtgttggctgtggcgggatccgtgcag
tcccgggggtttcgagcggcgctgcaggcggtggtggggaaggagggcatgccaaaactc
aagcccaagcccaagcgggtcacgtccacggggcgcaaggcgacggagccggcaaaagcg
gccggcgcggcggcggcaccggcaacagtcccagcagcacccgcggaagcagcagtagcg
ccagcaccggcaccggcatcagggccagcatcagcagctggggcgttgttgcccgaggcg
gccagcggggctgagggctcaggcgcctcgccggcgccgaagcggcggaagcggcagacc
gcgtcgacagcgtcgacagcgtcggcggcatcggacacggccgcggcggcttcacacgag
gtggcgctggctgcggcggtagggcaggactcgccgggggggcccgggagtgccgctggc
gcggttgccggcaagcggcctcgcggccggccgaagaaggacgccccaccaagtgcagcc
agggtggcggcggcggcgacagcggcagaagctgcggcggagcgcgccgcggcggcggcg
gaggaggccgctgcacagcaggccgccgcagagcgggagctatccagtagcagcagcggc
aacggcccgcgccccagcttcggcagtagcgtcttaagtccggtgccgcctccggagtcg
gacccgcgctacgtgtcgatggctgacgcggacgcgctgcagcccggcaactcgctgtac
gtggggcggctggtggagtggcacgccgcgcacgtggacgcggtgctggcggcgccggcg
cgcacgcccggcctgccgccgccctccctgcaggacttccagctgcagctcaacctggag
gccaggtgcaggaaccttgcggtggagcagtatcggcgcgagcaggaggcgctggtggcg
cggggcgcggtggagggggcgctgccggcgcggcggctgacggaggcgtggctgccgcga
ctgacggcggcgctgacggcgcggttcaaccagttcgccgcccttcaagacccggccaag
cagcaaaggcgccgcggcagtgccgccacctccaccatcaacctgcgcaagggcagcggc
agcggcagcggcggcaaggggcgcagctacgtgccactggagcaagcgctgaagatgatg
gacagcgtcggagcgggcgccgccaacaagagctctgacggcaccgacacagcggcggcg
gcggctggtgcgtcgacgtcgacgtcgacggctgcaggtgctgtgtcctcggcaggtggt
ggcggcggcagcgacgggggcgcgggcgacggcggcggcggcggcggcgccactgcgtcg
gcgtgggcggcggtggcggcgctgcccccggtgcggctgcgcgagctggctgagtgggtg
cccatggtcaagtcggtgccgccggagctgctggcgcgggcggccgtgtcgggcatgctg
aacagcctggtgctgcgggacagcggcgtggcgggcgagggcgaggacatgccgcgcggt
gtggcgctggccgtgcacgtggcggacgcactggggcgccgcgtgctggacatggtcacc
tacatggaggtgtgcgcggtggtgcatgagaagcggcgggcactggcgcgggccaagcag
gagctcggggcggcaatgggcaaggcggcggcggcggcggcggcgggcgcggagggcggg
ctggaggcggcggcggtggcgggcgggcagggcggcggcgaggccggggcggcggcggcg
gcggctgaggactccctaatgatggacccagtagtgtcggaggcggccgccaaagtgcgt
gcgacgcgggccgagctggaggcgttgcgggcggcggcggcggcactgcagccggcggcg
gcagacgggcagcttctgaacgacggcaccacggccgaggcgcggcgccgcgcggccccg
ctcaaggcgcggggctcgggcctcagcctggagcagcgggcggcggcactggggcagcgc
acacaggaccagctgtcggctgtgatggaccgcatcgggcggcgtgtgcggcaggacgag
ctggacggcgccctgttcgccgcactggcgggggcgcgcaccgcggcgcagagggtggac
gtcacgcgggcctggcaggcggcgctgagccaggcggcggaccggctgcagcagcagctg
ggcgcaggagcggcggaggcggagatagcggaggcggcaaagggtgtcgcagcagggggc
gcgaagcagcgtgtgaggaagggcgctctggaggctgcagatggcgacagcggcggtggc
ggtggcggcgggctaacagcggcgcaggccgcggagctcaagagccggcatgcgactctt
caggtggcgctgactaaggctggcgtgcagctgaaggcggcggaagagatgctggcggcg
gaggaggcggcggcggcagcggcagcggaagagaaggtgaaggctagcccgcgcaaggcg
caagggcggcccaagaaaacggcagcggcaggcagcggtgccgccgccacctcgccttcg
gctgcggcgcctgttcaggcattggatttggatcaagtgatggcgcaggagcgtgatgcc
actactgctactgctagtgctacagctgtcgacacagatgcggctgcggcgggggacggg
gctgggctgggggacgcgctgcagcacctgcaccgcagcgtgttgaggcgggtcgtggcc
ggcacggaccgggcacagcggccgggggagtgggaccagtccacacgcgtcaaggtgggg
gcctgcctgctggacctcatgcttcgactgctcgaggtggaggtggaggcggaggcggac
gaggcggcggaggcggaggcggcggacgaggaggcggtgggcgggggcggtgacagcggc
cgggcggggggcaggcagcgtgtgatggagccggcgctgcgccacagcaccggcgctgcc
gccacgttccaccacggcggcttccagacacccgggctcgtgatgctgcacccgcaggtg
ttgcggcaactggagggcgatgtcgcgctgcagcggctgctgcagccgcgcttcatgccc
atggttgtggagccgcggccctggtgcggcacccgcgcgggcggcttcctgtcgcagacg
gtgccggtgatgaagacgcagtacagcccggcggtgatggagcggctggcctccgcgcac
gccgcgggccgcatgacgccgctgtaccaggcgctgacggtgctgggcaatgtgccgtgg
cgcatacacggccgcctgctggacgtcatggagaccgtgcagcggcagggcggcgggcgg
ctgggcctgccccagaaccagcctcaggagctgccgacccgcttcaccagcgccctcaac
cacgtgtggcggccgctgctgggtgccgacacgccggcgcagtgcggcacgccctacctg
cggctgcagcgcgaggggcggcggggcgggcagctgctggtgggggcggggcgcatgagc
gagtcggaggaggaggcctaccagcaccagtgcgacgctgtgcggctgctcaaccgcaat
gagtcgggactgcgatgtgcgctcaagtaccgcctggacgtggcgcggcagtacactggc
cggtacgacctgggggcgggcgtgtaccagctgtacggcactgacgtaccaactgcggcc
gacggcgccgtggcggcggcggcggctggcggcggcgagggcggcggcggtggtggtggt
ggtctgctggctggcagtgcggctggcagcggccgccccatcctgttctaccagccccac
cacgtcgacttccgcggccgcgcctacccgctgcacccgcacctgcaccacctgggcgac
gacgccacccgcggcctgctgcagttcgggcgcggccggccactgggcgagcgcggcttc
gactggctgctcatgcaggttgccaacctgtggggccagggtgtggacaagcggccactg
gcggagcggctggagtgggcgcggcagcagctgccggcggtgcgggcggcggcggcgcac
ccgctggaggggggcggcacatggtggcagcgcgcggagaagccgtggcagatgctggcc
acctgcttcgaggtggctgacgcgctggactccagcggcggcgtcaaccccaccgccttc
atcagccaccagcctgtgaaccaggacggcacctgcaacgggctgcagcactacgcggca
ctgggtcgcgacctgcgcggcggcaccgcagtgaacctggtgccggcagaccggccccag
gacgtgtaccaggctgttgctgacgcggtggctgagcgggtggagctggctcgtgcgcag
ggccgctcggaggcagccaagatccacggccacgtggaccgcaagctggtcaaacagagc
gtcatgacgtacgtgtacggcgtcacatttgtgggggcgcgcgaccagatcgagagccgc
ctggaggagcggggctggggcaaccccaaggagcggcgcaaggtggccacctacgtggcg
ggtattgtgtttgagtccatgagcgacgtgttcgggccggcggtgcgcgtgaggtcctgg
ctggaggactgcgccaagtacgcggtgtccgccggcgccccggtggtgtggaccagccca
ctgggcttcccggtggagcagccctaccgcaaggtgcccaccctgtccgtgcacacgtcg
ctgcagacattcagcatccgtgacaacagtcgcgacgcggtgtcgccgctggacgtgcgc
aagcagtgctccggcttcccgcccaactacgtgcactgcctggacggcgcgcacatgatg
atgactgcccgggcggtgcgggaggcgggcgcgtgcttcgccgccgtgcacgacagctac
tggacacatgcggcgtcggtggacctcatgaacaaggccatccgcgacacctttgtccag
cttcacgagcggccgctgctgcacgagctgcgccgcgagctgctgcgcaaccccgagtac
agcggggccaccgccgccctgccgcgcgtgccggcgcccgggcagctggacctgtcggtg
gtgcggcagtccacctacttcttctcctag
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