Chlamydomonas reinhardtii: CHLRE_10g438700v5
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Entry
CHLRE_10g438700v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLRE_10g438700v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cre03009
]
CHLRE_10g438700v5
Ribosome biogenesis [BR:
cre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLRE_10g438700v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WDR54
Nup160
PALB2_WD40
AP3D1
Motif
Other DBs
NCBI-GeneID:
5715972
NCBI-ProteinID:
XP_042920158
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All DBs
Position
10:2751903..2759645
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AA seq
963 aa
AA seq
DB search
MVKAYLRYEFSSAFGVISSSANPAYDASGKLLFTSALECISVWNAKQGSLVRTLSPVVAS
SSGGSGSSAAVAEVTVMTCAPTGSIIAAGYSDGTVRLWDYQSGDCAVTFKGHKSAVSSLR
YHGGGALLASGGRDTDVIVWDVVGETGLYRLRGHKDQVTDLTFLPRQSKLVSCSKDGLVK
VWDLDTQHCCQTVGGYKAEVWSLDVHPEAALLVTGATDDEIRMFAVRDPESADAGDAEPS
TAAAAGTGTGAGGRDHTVLVAMGAVKRGAASHERVALLRFSGGGGWLAVQGAGRGLEMFR
VRDEDEARRKMKRRKKRRKEKSSKKEKEGKGKGKAGAAADSDDEDDAAGVGAADDGEDGI
KAGDVLEAVQLISSKHGKIRAFAFAPPAARLPAGVACRLALALATNQIEVVDVSSESPEY
ATSSRLELPGHRSDVRCLALSPDDSALLTGSSDALKLWNPRTGACLATMDSGYALSVLFV
PGNKFAVLGTKAGSLEVYDLGAATRVHVEEGAHGGAVWSLAALPDKSGFVSGGADKSVKF
WQWSVVTTAGAGAEGGGRSLRLAHSRTVAMADDVLSVRVSPDGRLLAVALLDATVKVYYA
DSMKFFLSLYGHKLPVLCMDISSDSTLLLTGSSDKNIKVWGLDFGDCHKSLFAHGDAIMS
VAWVPGTHYAFSAGKDRLLKYWDLDRFELLLELPGHHGELWALGVSQFGDFVVTGSHDRS
IRRWERTAEPFFVEEERERRLESLFEQDLENTAADRDAAALGGEGAEGGAAAPAGRRTLE
TVSAADSIIDALEAAALEMDRLRQADKEAAEAERAGKPPPRPLPINAVMGGMPPSAYVLK
VVSGVRASELEQAVMLLPFADALKLLSYLPRWLEAGGPAVELTVRLAVLLVRLHQGALQT
TAAARPVMLGLQRRLRRAAQGLKDVVGFNMAALGHLARRARERDGGTEADGVAGVKRQLM
GPA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagcatatcttcgctatgagttttcttcagcatttggggttatcagcagctcc
gcaaacccggcctacgatgcgagcggaaagctcctcttcacatcggcactggagtgcatc
tcggtgtggaacgccaagcagggcagcctggtccgcacgctgagcccggtcgtggccagc
agcagcggcggcagtggctccagcgcggcggtggcggaggtgacggtcatgacctgcgcg
ccaaccggcagcatcattgccgccggctattctgacggcacggtccggctgtgggactac
cagtccggagactgcgcagtgacgttcaaggggcacaagtccgcagtgtccagcctgcgc
taccacggcggcggcgcgctgctggcgtccggtggccgcgacacggacgtgatcgtgtgg
gacgtcgtgggcgagaccgggctgtaccgactgcgggggcacaaggaccaggtcacggat
ctgacgttcctgccgcgccagtccaaactggtcagctgcagcaaggacggcctggtcaag
gtgtgggacctggacacgcagcactgctgccagacggtgggcggctacaaggcggaggtg
tggtcgctggacgtgcacccggaggcggcgctgctggtcacgggcgccacagacgacgag
atacgcatgttcgcggtcagggaccccgagtccgcggacgccggtgacgctgagcccagc
acggccgccgccgccggcaccggcaccggcgccggcggccgcgaccacacggtgctggtg
gctatgggcgccgtcaagcgcggcgccgccagccacgagcgcgtggcgctgctgcgcttc
agcggtggcggcggctggctggcggtacagggggcgggccgcgggctggagatgttccgg
gtgcgtgacgaggacgaggcgcggcggaagatgaagcgccgcaagaagcgccggaaggag
aagagcagcaagaaggagaaggagggcaagggcaagggcaaggcgggggctgcggcggac
agcgatgacgaggacgacgcggcgggcgtgggcgcggcggacgacggcgaggacggcatc
aaggcgggagacgtgctggaggccgtgcagctgatcagcagcaagcacggcaagatccgt
gccttcgcctttgcgccgcccgctgcgcgcctgcccgccggcgtggcgtgccgcctggcg
ctggcactcgccaccaaccagatcgaggtggtggacgtgtcttccgagtcgcccgagtac
gccacatccagccgcctggagctgcccggccaccgctccgacgtgcgctgcctggcgctc
agcccagacgactcggccctgctgaccggctccagcgacgccctcaagctgtggaacccg
cgcaccggcgcctgcctggccaccatggacagcggctacgccctcagtgtgctgttcgtg
ccgggaaacaagttcgcggtgctgggcaccaaggcgggctccctggaggtgtacgacctg
ggcgcggccacacgtgtccacgtggaggagggcgcgcacggcggcgccgtctggtcgctg
gcggcgctgcccgacaagtccggcttcgtgtcgggcggcgcggacaagtccgtcaagttc
tggcagtggagcgtcgtgaccacggcgggcgcgggcgcggagggcggcgggcgcagcctg
cggctggcgcactcgcgcacggtggccatggcggacgacgtgttgagtgtgcgtgtcagc
ccggacggaagactgctagcagtggcgctgctggacgccactgtcaaggtctactacgcc
gatagcatgaagttcttcctgtctctgtacggccacaagctgccggtgctgtgcatggac
atctcctccgactccacgctgctgctcaccggctcgtcggacaagaacatcaaggtgtgg
ggcctggacttcggcgactgccacaagtcgctgtttgcgcacggcgacgccatcatgtcc
gtggcctgggtgccgggcacgcactacgccttcagcgccggcaaggaccggctgctcaag
tactgggacctggaccgctttgagctgctgctggagctgcccggccaccacggcgagctg
tgggcgctgggcgtcagccagtttggcgacttcgtggtcacgggctctcacgaccgctcc
atccggcgctgggagcgcaccgcggagcccttctttgtggaggaggagcgcgagcgccgc
ctggagtccctgttcgaacaggacctcgaaaacacagcggccgaccgggacgcagcagcc
ctgggcggagagggcgccgagggcggcgccgccgcgccggcgggccgccgcacgctggag
acggtgagcgccgccgactcgatcattgacgccctggaggcggcggcgctggagatggac
cggttgcggcaggcggacaaggaggcggcggaggcggagcgggccggcaagccgccgccg
cggccgctgccgatcaacgcggtgatgggcggcatgccgcccagcgcgtacgtgctcaag
gttgtgtcgggcgtgcgcgccagcgagttagagcaggcagtgatgctgctgcccttcgcg
gacgcgctcaagctgctgtcctacctgccgcgctggctggaggcgggcgggccggcggtg
gagctgacggtgcggctggcggtgctgctggtgcggctgcaccagggcgcgctgcagacc
acggcggcggcgcggccggtgatgttgggactacagcggcggctgcggcgggcggcgcag
gggctgaaggacgtggtggggttcaacatggcagcgctggggcacctggcgcggcgcgcg
cgggagcgggacggcggcacggaggcggacggcgtggcgggcgtgaagcggcagctgatg
gggccggcgtga
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