Magallana gigas (Pacific oyster): 105318373
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Entry
105318373 CDS
T03920
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105318373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105318373
04147 Exosome [BR:
crg04147
]
105318373
04090 CD molecules [BR:
crg04090
]
105318373
Enzymes [BR:
crg01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105318373
Transporters [BR:
crg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105318373
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105318373
CD molecules [BR:
crg04090
]
Proteins
105318373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_28
Rad17
AAA_5
AAA_14
G-alpha
AAA_30
AAA_21
DUF5906
AAA_25
AAA_15
AAA_7
nSTAND3
DUF815
APS_kinase
SbcC_Walker_B
AAA_23
Motif
Other DBs
NCBI-GeneID:
105318373
NCBI-ProteinID:
XP_034309147
LinkDB
All DBs
Position
LG9:complement(28137724..28175854)
Genome browser
AA seq
1370 aa
AA seq
DB search
MSKQPQLLGYTQTSKDGSAMSGMEMNGKGLGKDSEGEEMMASNGRPATASTVDVDNVDVS
ADKDGVDEGEKDKKKEEPQKMVGNLEIFKYSDCIDIIMMILGSICAMCHGASLPCMIIVF
GSMIDTFVESKKFEYFLLSLNSTYLSSAGLTVNGIIKEPELLKPHLNNLTTYYNVTDFTL
YNDQLSNDLLDVMTEFAVYYIAIGCAVLVLGYGQVVGWVTAAERQCHKIRIKFFSNVMRQ
EIGWFDTHDSGELSTRLSDDINKIHLGIGDKMGTFIQWMSGFFAGFAIGFAYGWKLTLVI
LAISPVLAGVAVLMSKLMSMTSSKELSAYAKAGSVAEEVLGAIRTVAAFGGQTKECNRYN
GHLDEAKKSGIKKGITVGWSTGLVFLVVFCAYGLGFWYGAKLIREDDDYRVSNVLIVFFS
VLIGAFSLGHAAPSMQSLATARGAAYTIFDLMEQEPHIDSSSDAGEKPSKVAGNITLRNV
KFRYPARENVQVLKGVSLDINRGETVALVGSSGCGKSTIIQLLQRFYDPEEGEVALDGRN
IKNLNTKWLRQQIGVVSQEPILFATTIAENIRYGKEAISQQEIEAAAKMANAHDFIMNFP
KKYETLVGERGAQMSGGQKQRIAIARALVKDPRILLLDEATSALDTDSESVVQEALDKAR
AGRTTIVVAHRLSTIKTADKIAGFQEGVIVENGTHEQLMEKGGVYHTLVTNQTQDVDEEE
GLQDDEEEELIAEFIQDKKTVDRQLSRQTSHQAKSPLKTQLSVDKVPTTTDAKEGKKEDS
EEPPAVSIAKVLKMNAKEWPYIMFGCLAAIGNGGVQPAFAVIFSEILGVFSETDPDVQNE
KINLYVLLMCGIGVISFFTFLVQGYCFGYSGESLTSRLRRLVFKAMLRQDISFFDNHKNS
TGALTTRLATDASQVHGISGARLGSIVQSIANLGTAFVIAFIYGWKLTLVIIAFLPFIMI
AGALQMKLLQGVAGQNKEALEEAGKTATESIENIRTVASLTKEEKMVDNYRSLLIGPYYT
SLKKAHLTALAFSFSTGILFFAYAAAFWFGAYLIKEGEMDYTDVFKVFGAIVFGAMALGQ
SSAFAPDASKAKVSAAHIFYLLEQEPIIDPYSEEGKKDLPVNSKIRFEGLRFRYPTRPDV
EVLQGLTLEVEPGETVALVGASGCGKSTTVQLVERFYDPEDGIVYLDSNNIKDLNVQWLR
RQIGIVSQEPVLFDCSIAENIAYGDNSREVPMAEIIEAARKSNIHNFIQSLPKGYDTLCG
DKGTQLSGGQKQRVAIARGLVRNPKILLLDEATSALDTESEKIVQEALDKAREGRTCIVI
AHRLSTIQNADKICVIKHGQVAEQGRHSELMASQGIYYRLVTKAQSRKEK
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagcctcaactactgggctacacccaaacctcaaaggatgggtcagcaatg
agcggcatggaaatgaacggaaaggggttgggaaaagattctgaaggggaggaaatgatg
gcaagtaatggccgcccggcaacagcatccacggtggatgtggataatgtggatgtcagc
gcggataaagacggagtggatgaaggagagaaagacaaaaagaaagaagagccgcagaag
atggtcggaaatttagaaatttttaaatactcagattgcatcgacattattatgatgata
cttgggtccatatgtgcaatgtgccatggcgcctccttgccttgtatgattatcgtgttc
ggcagcatgatcgacacattcgtggagtccaagaaattcgaatattttctcctgagctta
aattctacatatttatcatctgctggactcactgttaatggaataattaaagagcctgaa
ctactgaaacctcatttaaacaacctgaccacctattacaatgtcacagacttcacactg
tacaatgaccagctcagtaatgatctgttggacgtaatgaccgagtttgctgtctattac
atagccatcggctgtgctgtcctcgtattggggtatggacaggtggtggggtgggtgact
gccgcagagcgacaatgccacaaaatcaggatcaagttcttctccaatgtaatgaggcaa
gagattggctggtttgatacgcatgactcgggcgagcttagtaccagactatcagatgac
atcaataaaatccaccttgggataggggataagatggggaccttcatccagtggatgtcc
ggattctttgctggatttgccatcggatttgcttatggatggaaactgacccttgtcatc
cttgctatcagtcccgtattggccggagtggccgttctgatgagtaagctgatgtccatg
acctccagtaaggagttgagtgcgtatgccaaggcggggtcggtggcagaggaagtgctt
ggggccatcagaacggtggcagcttttggtggacagacaaaagaatgcaacaggtataat
ggtcatctagatgaggccaagaagagtggtataaagaaaggtatcaccgttggatggtca
accggactagtgtttctagtcgtattctgcgcctacggactcgggttctggtatggggca
aaacttatccgtgaagatgacgattatcgagtatccaatgtcttaatcgtatttttcagt
gttttaattggagcgttttctttgggtcatgctgcgcccagcatgcaaagtttagccact
gctagaggggcagcatacactatctttgatcttatggagcaggagcctcacatagactcg
tcctcggacgcgggcgagaaaccatctaaagtggctggaaatattacgttgaggaatgtc
aaattccgctaccccgccagagagaatgtccaggttctgaagggtgtgtcattagacatc
aacagaggagagacggtggccctggtgggctccagtggctgtggtaagagtaccattata
cagctactacagcgcttctacgacccagaggaaggagaggtcgcactggacggtaggaac
atcaagaacttgaacacaaaatggctgagacagcagataggggtggtcagccaggaaccc
attctgtttgccaccaccatcgccgagaacatccgctacggcaaggaggccatctctcag
caggagatcgaagccgctgccaaaatggccaacgctcacgactttatcatgaattttcct
aaaaaatacgagacactggtgggagagaggggggcccagatgagtggaggacagaaacag
aggatcgcaatcgcccgggccctggtcaaggaccccagaatcctgctgctggacgaggcc
acctcagctctggacacggatagtgagtcggtcgtacaggaggcgttagacaaggccagg
gctggtagaaccacgatagtggtagcccatagactgtccaccatcaaaaccgccgacaaa
atcgccggcttccaggaaggtgttattgtagaaaatggaacacatgaacagctgatggaa
aaagggggtgtgtaccacacactggtgaccaatcagacacaagatgttgatgaagaagaa
ggattacaagatgatgaagaggaggagctgatagccgagttcatccaagacaagaagacc
gtcgaccgtcagctgtctcgtcagacatctcatcaagccaagagtccgctcaagacccag
ctgtctgtcgataaagtccccaccacaacagatgccaaagaagggaaaaaggaagattca
gaggaaccccccgcagtcagtatcgccaaggttttgaagatgaatgccaaggaatggcca
tacattatgtttggttgtctggcggccataggtaacggaggagtccagccagccttcgcc
gtcatcttctcagaaatcctaggggtgttctctgagacggatcctgatgtacagaatgag
aagatcaacttgtacgtcttactgatgtgtggcatcggagtcatcagcttcttcaccttc
ctcgttcagggctactgttttggatattctggcgagagcttgaccagcagactgcgtaga
ttggtgtttaaggccatgctcagacaggacatctctttcttcgacaaccacaaaaactcc
accggcgctctcaccacgcggctggccaccgacgcatcgcaagttcatgggatctctgga
gctcgattaggaagcattgtacagagtatagctaacctagggacggcctttgtgatcgca
ttcatctatggctggaagctgactctggtgataatcgcatttctcccattcattatgatc
gctggtgccttacaaatgaagcttttacagggagtcgcaggccaaaacaaagaagctttg
gaagaagctggcaagacagccacggaatccatcgaaaacatccgcacggtggcaagtctg
accaaggaggagaagatggtggacaactaccgcagcctgctgattggaccatactacacg
tcgctgaagaaggcccacctcaccgccctcgctttctccttctctacaggcatcctcttc
ttcgcctatgctgccgctttctggtttggagcttacctgattaaggaaggagagatggat
tacacagatgtattcaaggtatttggtgccattgtgtttggagccatggctttaggacag
tccagtgcctttgctccagacgcgtctaaagccaaggtgtccgcagctcacatattctat
ctcctggaacaggaacctatcattgatccgtactcggaggaaggcaagaaagacttacct
gtgaatagcaagatccgctttgagggtcttcgtttccgctacccgacccgaccggatgtt
gaagtgttgcagggcctaaccctggaggtggaacctggagagaccgtagcgctggtcgga
gcctcgggatgtggaaagagcaccaccgtacaactggtggagcggttctatgacccagag
gatggtatcgtgtatttggacagtaacaacattaaggatctgaacgtccaatggctgagg
agacagatcggaatagtatctcaggaacctgtattgtttgactgcagtattgccgagaac
atagcgtacggggataactcccgagaggttccgatggcagagattattgaggctgccaga
aaatccaacatccataattttattcaatcattgcctaagggctatgatactctttgtgga
gacaaggggacacaactctccggaggacaaaaacagcgagtggcaattgcccgaggactg
gtcagaaatcccaagattcttctgctggatgaggccacatctgccctcgataccgaaagt
gaaaagattgtacaggaagctctggacaaagcacgggaagggagaacgtgtatcgtcatc
gcacatcgactgtccaccatccagaacgccgacaaaatctgtgtcatcaaacacggtcaa
gtggcggagcagggtcgtcacagcgagctgatggccagtcagggcatctattacagactg
gtcacgaaagcgcagtcacgaaaggaaaaatag
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