Crassostrea gigas (Pacific oyster): 105319624
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Entry
105319624 CDS
T03920
Name
(RefSeq) uncharacterized protein LOC105319624 isoform X1
KO
K06238
collagen type VI alpha
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04512
ECM-receptor interaction
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105319624
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105319624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105319624
00536 Glycosaminoglycan binding proteins [BR:
crg00536
]
105319624
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105319624
Glycosaminoglycan binding proteins [BR:
crg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105319624
Hyaluronan
Extracellular matrix or blood plasma proteins
105319624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
Copine
CBM_14
vWA-TerF-like
DUF3439
Motif
Other DBs
NCBI-GeneID:
105319624
NCBI-ProteinID:
XP_011415561
LinkDB
All DBs
Position
LG7:44958578..44976977
Genome browser
AA seq
1953 aa
AA seq
DB search
MRLPILLALLGLFVHNAYLQSLNCYVPADIMILLDGSDSIQDRDWYKMKEFVQLLIDNFD
IARDAIHLGMVVYSSRIGDHIGLNSFKDKNMLKLLAGALNHPKDSTNTAKGIEYVREKFR
MDGRPGVPKIAIVITDGSSDNPRNTKLQANAAKNEGIKVLAVGVGGHMFKDELRSIASNP
SKVFTSPTFGTLITLVSEIRNMVCQVITTTTTTTTTPKIPTQPPIYVPPPKDMICNVPGD
IVFLMDGSDSISDVDFMRQKAFVANMVDNFEISPEAIHVGMVVFSTMIGDVIGLQPAKGK
PLLKILAKSLKQPKIGTNTAKGIQRVRKMMAEEGRQFAPKLAVVITDGRSTRPQETIREA
SLAKAEGITMIAIGVGTEIFQDELRQLASSPTQAFEVRDFSKLGEIINTMRDLICQEIKT
TTSTTTTTEMPTPPPSRVPPPDGLICNVPADIGILLDGSDSINDRGFIKEKNFAANLINN
LDIGPDTIHASVIVYSTLIGQTIPFTPFKPKTLLTILTRNLKQPKVGTNTAKGINKMREY
FRTQGRSNAPKVMVIVTDGRSTRPRETIAEAELAKREGIVVIAVGVGTEIFRDELRQIAT
NERKLFEVSDFAALQRIIIAIRDLICQVITTTPAIQTTTPLPATTTLSPIPNCDVPAEIM
FMLQGSQSTDDQSWADSKRFLSTVVNNMYASPSAHHYGAFVYGSAIGDHVGLQPFKDKFE
LQNYFNSMMKPTSSGSDVAAALKMMREVFREQGRPSAPKIGVMITNEPTSTRRLTMAETD
LAKTEGVKLYTIGVGNLVDRGELLNTATSEKHVMLTPNARSLESILPNLRHLICDDIMTP
ITTRPPRPSHNFTSLCAGCLYDRGTGYNFFPGDCSKFVQCWENNGYVHGVVKQCPFGEFW
KQEELKCVPSIHVHCTMDPCLRAPNGFTYGMEESRCRSYWICVDSHSLGSCCAPGTHYVE
GMGCMRGLACNDACPPNGGKIYTPCKKQAHWDRRFYMDDVPQQKLVRHCSPGTIFSKEYC
TCIPDMEGLIPVLPGDQCKASAYLPFDVDLEDKSGSNTAVMVRNVTMTPYGSAHFTGNSA
LTLYKYADMSLGNKLLISFKFKFDRWPDSLDHAGRVVHYEKGETHWRFDIQSKTWTRNIT
IGGGWNAGRLTRMFRKLMGSTNAQQMNLHMIEIANSPDFKALLYHLGFMPDATNALQILR
IIFSGQGSNLINQILQKIGNVHGSEEVRKLLYNLLRIEGMNKWIKDHTGGNHKHAFVNWQ
RFLNSLNLNEKDWNKGGIPGLNVDHNMGKLIADLWRIFVNEHGMNTRDWKDILKITFNGD
KNRHFGIEFLGEIEGVLGRNKTIKDLWFDFLKGRNVSVSIFGNYTHGGEAHKKHPHFLRY
IEDLVKSGKGGEWLNYVLGGGKIHTDHGGFTHEGVNNIADIWREYVTDARLDQLSSLHPH
LTWTLTGGGTGGQRTEIFIDELRNVLANDTVRNHFLDFLKKYDINLVGTGNGWKLVRGGN
QNDVGAWLYWLFTQTGNNHGGSGTSTSITWPWFPGGEGLDGWDIGLGFEWIFGPVRKPTG
GPWNRPIGSVVRKFFWEYDEEGWHKRLFTGYPSGWFGLKYGFSKMGQNYIMKLWKEFIAR
FKQHILSWQNNLIWSDRQDFSESLSEYVDFITEMQILLTNTSCKDDWLKYLKERRIRLSV
TENGWDVSDDDHDFDNSEWVSWLLQFPFADSGSSWIGGSSSSGGFSGQRVNSAFGEGWSN
MLFGGPSDSHSGESSSGGSSTESLDSILKSLSNGFAGGSGTSSIQDSQEYYSGGFGMGDM
FGLLAAEEFLRKKRSTDNVVRHKRQAHAPFHYQSLVGNCHGNNPSIDIAANERNVKMILV
TDGSNQPGELILPIVQGWNEVTLVYNGRDMHGMVNNWQGEKKTSIPMRGNIQSRPEGISL
GYCPKYDGLQGKIDDFAFYECIPLAIQNKIGRS
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgccgatcttgctggcactgttgggcctgttcgtccacaatgcctacctacag
tcactaaattgctatgtccccgctgacatcatgatcctgcttgacggttccgactccatt
caggaccgtgactggtacaagatgaaggagtttgttcaacttctcattgacaatttcgac
atagcccgggacgccatccatcttggaatggtggtctacagttctcggattggggatcat
attggcctcaactcattcaaagacaaaaacatgctgaagctgttagcaggtgctcttaat
cacccgaaagacagcacaaacacggctaaaggaattgaatatgtaagagagaagttccga
atggatggtcgaccaggtgttccgaaaatcgctatcgtgatcacggacggaagttcggac
aatccaaggaacacaaaactacaggcgaatgcggctaaaaacgagggcattaaagtccta
gctgtaggagtcgggggtcatatgtttaaggacgaacttcggagcatcgcctctaatccc
agtaaagttttcacctctccaaccttcggaaccctaatcacgctggtttctgagatacga
aacatggtctgtcaagtcattacaactacaaccactaccacaaccactcctaagattcca
acacagccgcctatctatgtgccaccaccaaaggatatgatctgcaatgttcctggcgat
atcgttttcctcatggatggtagcgacagtatcagtgacgttgacttcatgcgccagaaa
gccttcgtcgccaacatggtggacaactttgaaatcagtccagaggcaatacatgtaggc
atggtagtgttctccacaatgattggagatgttataggcctacaaccagcaaagggcaaa
ccgctactcaaaattctggccaagagtctgaaacaaccaaaaataggaactaacactgcg
aagggtatacagagggtcagaaaaatgatggcggaagaaggtcgacagttcgcgccaaaa
ttggcggtggtcattactgatggtcggtcaactaggccgcaagagaccattcgagaagca
agtcttgccaaggccgaaggaattacaatgatagctattggagtaggaaccgaaatcttc
caagacgaacttcgacagttggcgtcttcacccacgcaagctttcgaggtccgggatttc
agtaagctaggagaaattatcaacaccatgagggatctcatctgtcaagagataaagacc
accacttcaacaaccaccactacagagatgcctaccccaccaccctccagggtgccacca
ccagacggtctgatctgtaacgtccccgccgacattggtatcttactggacggctctgac
agcatcaatgaccgcgggttcatcaaagagaagaactttgctgccaacctgataaacaac
cttgacatcggtccggacacaatccacgctagtgtcattgtttacagcacactgattggt
caaaccattcccttcaccccgttcaaaccaaagaccttgctaacaatccttacaagaaac
ttgaagcaaccaaaggttggtaccaatactgctaagggaataaacaaaatgagggagtac
ttccgaacacaaggtcgatctaacgcacccaaggtcatggttatcgttactgacggccgg
tccaccagaccgagggagacaatagcggaagcggaactagcaaaacgagagggaattgtg
gttattgctgtcggtgttggaacagagatcttcagagacgaactgagacagattgccacc
aatgagaggaagctgtttgaggtatccgactttgctgctttgcaaaggatcatcatcgca
attagagatttgatttgccaagttatcaccaccacaccagctatacagacgacaaccccg
ctaccggccaccacaacactgtcaccaattccaaattgcgacgtgccggccgagatcatg
tttatgctgcaaggttctcagtctacggatgaccagagctgggccgacagtaagcgtttc
cttagtaccgtggtcaacaatatgtacgccagtcccagcgctcaccactacggagccttc
gtctacggcagcgccatcggggatcacgtgggtctacagccattcaaagacaaattcgaa
ttgcagaattacttcaactctatgatgaaaccgacgtcatccggttcagatgtagcggca
gctttgaagatgatgcgagaggtgttccgagaacaaggaagaccatcagctccaaagatc
ggagtcatgatcaccaacgagccgacatcaacacggcgtcttacaatggcggaaaccgac
ctggctaaaacggagggcgtgaagctttatactataggcgttggaaacttggtggataga
ggcgaactgctgaatacagccaccagtgaaaaacacgtcatgcttaccccgaacgctaga
agcctggaatctattttaccaaaccttcgacatttgatatgtgatgatatcatgaccccg
atcacaacaagacctccacgtccgtcgcataacttcacaagtctgtgtgcgggatgtctc
tatgacagaggaacagggtacaacttcttccccggagactgcagcaagttcgtgcagtgc
tgggaaaataatggctatgtacatggcgtcgtgaagcaatgtccatttggagagttctgg
aaacaggaggaattaaagtgtgtcccatctatacatgttcactgtacaatggacccctgc
ttacgcgctcccaatggattcacgtacggaatggaggaatcccgctgtcgttcgtactgg
atctgtgttgacagtcacagtcttgggtcatgctgcgctcctgggacccactatgtcgag
ggcatgggatgcatgcggggattggcatgcaacgatgcttgtcctccgaatggcgggaaa
atctatacaccgtgcaagaaacaggcccattgggatagaagattctacatggacgatgtc
ccgcaacagaaacttgtccgccattgttctcctggaacaatattcagcaaagaatactgt
acctgtattcctgatatggagggactaattcctgtacttcctggagatcaatgtaaagcg
tccgcctaccttccttttgacgtcgatttggaggacaagtctggatccaacactgcagtg
atggtgaggaacgttaccatgacaccctacggaagcgcccatttcacgggcaacagcgcg
ctcaccctgtacaagtatgcagatatgagcctcggaaacaaacttctcatcagctttaag
ttcaagtttgaccgttggccggacagtttagaccacgcaggtagagttgtacattatgag
aagggcgagacacattggagatttgacatacaaagcaagacatggactcgtaacattaca
atcggcggaggatggaatgcaggcagactaacaagaatgttccggaagctgatgggttca
acaaatgcacagcaaatgaatctgcacatgattgagatcgccaactctcctgatttcaag
gctttactctaccatctaggatttatgccagatgcaacaaatgctcttcaaatcctgcgc
attatattctctggacagggatctaatttgatcaaccagatattgcagaaaattggaaac
gttcatgggtctgaagaagttagaaaacttctatacaatcttcttcgaattgagggcatg
aataaatggattaaagaccatacaggaggaaaccataagcatgcatttgtcaactggcag
agattcctaaattcactcaacctgaacgaaaaagactggaacaaaggcgggatccctgga
ttaaatgttgatcacaacatgggtaaacttatagctgatctttggaggatatttgtcaat
gaacatggaatgaatacgagagattggaaagacattttgaagattacctttaatggtgat
aagaatagacacttcggaatagaatttttaggtgaaattgaaggagtacttggacgtaat
aaaaccattaaagatctgtggtttgactttttgaaaggaagaaacgtgagtgtttccatc
tttggaaattacacacacggtggtgaggctcataagaaacatccacactttctccgctac
atagaagatctggtaaaaagtggcaaaggaggcgaatggttgaactacgtactgggagga
ggaaaaatacatacagaccacggaggattcacgcacgaaggcgtcaataacattgcagac
atctggagggagtacgtaacagacgccagactagaccagctgtcctccttacatccacat
cttacttggactctcactggtggaggaacgggcggacagagaacggaaattttcatcgat
gaactgaggaacgtactagcaaacgatacagttcgaaaccacttcctggactttttaaag
aaatatgacatcaatcttgtcggaactggtaatgggtggaaactcgtccgtggaggcaat
cagaatgatgttggtgcatggttatactggctctttactcagactggcaacaaccacggt
ggatccggaacaagtacatccatcacttggccttggttcccagggggagaaggactagac
ggttgggatatcggtctagggtttgagtggatatttggtccagtacgcaagcccactgga
ggtccctggaatcgccctattggttcggtggtgaggaagtttttctgggagtatgatgag
gagggctggcacaaacgtctgttcaccggttacccgtcaggctggttcggtcttaaatac
ggttttagtaaaatggggcaaaattacataatgaaattatggaaggagtttattgctcgc
ttcaagcaacatattttgtcatggcaaaacaatcttatttggtctgaccgtcaagacttt
tcagaatcattgtccgaatatgtagattttatcactgaaatgcaaattctccttaccaac
acatcctgcaaagatgattggctaaagtatttgaaagagcgcagaatccgcctgtcggta
acggagaacggatgggacgtcagtgatgacgaccatgacttcgacaacagtgagtgggtc
agctggttgcttcagtttcccttcgctgactcaggttcttcttggatagggggatcgtcc
tcgtcggggggcttcagcggtcagagagtgaactcggcgtttggggagggctggtctaac
atgctcttcggcggcccgtctgattctcattctggcgagagttcgtccggtggttcgtcc
accgagtcattagactcaattttgaaaagtctctctaatggtttcgcaggtggttctgga
accagttctatacaggatagccaggagtattattcaggaggatttggaatgggtgacatg
tttggattacttgctgccgaagaattcctgaggaaaaaacgatctacagataatgttgtt
cgacataagcgtcaggcgcatgcgcctttccactaccaatcattggttggtaattgccat
ggcaacaatccgtcaatagatattgcagccaatgaaaggaatgtgaaaatgattttagtg
acggatggaagcaaccaacctggtgaacttattcttccaattgttcaaggctggaatgaa
gttacattagtatacaacggcagagatatgcatggaatggtgaataattggcaaggggaa
aagaaaacatcaataccaatgagaggtaatattcagtcacgtccagaggggatttctctt
ggatattgtccaaaatacgatggtctccaaggaaaaatcgacgatttcgccttctatgag
tgcataccactggccatacaaaacaagataggacgttcctag
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