Magallana gigas (Pacific oyster): 105328096
Help
Entry
105328096 CDS
T03920
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform X1
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00280
Valine, leucine and isoleucine degradation
crg01100
Metabolic pathways
Module
crg_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
105328096
Enzymes [BR:
crg01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
105328096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
F420_ligase
Motif
Other DBs
NCBI-GeneID:
105328096
NCBI-ProteinID:
XP_034321010
LinkDB
All DBs
Position
LG2:47777471..47790174
Genome browser
AA seq
561 aa
AA seq
DB search
MLRRYILSLGSREIAKCQKRLMSLDAVAPIGTAIEKDANYKENAETMQVLVDDLKSKVTK
IMQGGGEAARKKHTDRGKMLPRDRINSLLDPQSPFLELSQLAGYQLYGEDDVPAGGIITG
IGRVSGVECMIVANDPTVKGGSYYPVTVKKHLRAQEIAQQNHLPCIYLVDSGGANLPRQE
DVFPDRDHFGRIFFNQANMSALKIPQIAVVLGSCTAGGAYVPAMADESIIVKKHGTIFLG
GPPLVKAATGEEVSATDLGGAQLHCSKSGVTDYFAQDDIHALHLARRCIKNINYSKDPKV
TLETPEEPIHPAEELYGIVGANLKKTFDVREVIARIVDGSKFDEFKTMYGETLVTGFARL
WGYPVGILGNNGVLFSESALKGTHFIELCCQRNIPLIFLQNITGFMVGRDAEAGGIAKNG
AKMVTAVACAKVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVMGGEQAASVL
AQITREQRIKAGKTLTPDEEEAIKIPVIKKYEKEGHPYYASSRLWDDGVIDPADTRTVLG
LSLSASLNAPQQHTHFGVFRM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtagatacatactgtcacttgggtcaagagaaatagcgaaatgtcagaaacga
ttaatgagcttggatgcagttgcaccgattgggactgcaatcgaaaaagatgcaaattac
aaggaaaatgcagagacgatgcaggttcttgtggatgacctgaaatcaaaagtcacaaaa
attatgcaaggtgggggtgaggcagctcggaagaagcacactgaccggggaaagatgtta
cccagggacaggatcaactctctgctggacccacagtccccgttcctggagctgagtcag
ttagcggggtaccagctgtatggagaggatgacgtccctgcggggggcatcatcaccggg
atagggcgggtgtcaggggttgagtgtatgattgtagccaatgatcctacagtcaagggt
gggtcctactatcctgtgacggtcaagaaacacttgagggcccaggaaattgcccaacaa
aaccatctaccctgtatatacttagtggactctggtggtgccaacctgccccgccaggaa
gatgtgttcccggacagggaccactttggaagaatcttcttcaaccaagccaacatgtct
gccctcaaaatacctcagatagcagtggtgcttggaagttgtacggcaggaggggcctat
gtaccagccatggccgacgaaagcatcattgtcaaaaaacacggaaccatcttcttagga
ggacctccactggtgaaggcagctacaggggaggaagtatcagccactgaccttggaggg
gctcagttacactgcagtaagtcaggcgtaaccgattactttgctcaggacgacattcac
gctcttcatttggcgaggcgatgtatcaagaacatcaactactccaaagatcccaaggtt
accttggagaccccagaggaaccaatccaccctgctgaagagttgtatggaattgtggga
gctaatctaaagaaaacctttgatgttagagaggtgatagctagaattgtagatggaagt
aaatttgatgaatttaaaaccatgtatggggaaactctagtcacaggatttgccagacta
tgggggtatcctgtaggaattctgggaaataacggagtattatttagtgaatcggcatta
aagggaacacattttatagaactttgttgccagagaaacatacctcttatatttcttcaa
aacattactggttttatggttggtcgagatgctgaggccgggggcattgccaaaaacggg
gccaagatggtaaccgctgtagcgtgtgccaaagttcccaaatttactgtgataatcgga
ggttcctacggagcagggaattatgggatgtgtggcagggcctacagcccaaggtttctg
tacatgtggccaaatgccagaatatctgtgatgggaggggaacaggcggccagtgttctc
gctcagatcacgcgggaacagaggatcaaggccgggaaaacgctgacacctgatgaagag
gaggccattaagattcccgtgattaagaagtatgagaaagagggtcatccatactatgcc
agttctaggttatgggatgatggtgtgattgacccagcggacacacggacagtacttgga
ctcagtctcagcgcatcactcaatgccccccaacaacacacacattttggagtgttcagg
atgtag
DBGET
integrated database retrieval system
