Crassostrea gigas (Pacific oyster): 105330722
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Entry
105330722 CDS
T03920
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105330722
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105330722
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105330722
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105330722
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105330722
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105330722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
105330722
NCBI-ProteinID:
XP_034333863
LinkDB
All DBs
Position
LG5:complement(10211620..10221557)
Genome browser
AA seq
1031 aa
AA seq
DB search
MRVLESGATPSYNMGKNKKHKLRKTKDVSDSSDDALAVPSCNHINMAVNVAAMRKGLGKQ
VYGECASCTKTALEGDSSQGAEAAPALLDTEPTLWVCLQCGNQGCDRNSRDKHALKHYET
PRSSCHCLVINTTSWTVWCYKCDDEVQLEQSKRLQESVDIIRKQAGLPQAEPVRKQSQSV
SSTSVVEQAFKPSTSTPRSSGMCSKVKGLSNLGNTCFFNAVMQNLTQTPCIESVVVERSK
KGRLSSLSCKRDSDLDSSSGSEDSDDEASIDLSPIEIVLPEAGPLTQTMIAFLQEMNNST
GRTSTVNPSPLFTQICKKAQRFRGFQQQDSHELLRYLLDNMRTEEIKRGQAGILKHFKLP
ENVNPKKVDDDTKIKIKEYGRQVKYTFVDSLFGGYLMSTVTCEECKNISQIFEPFLDLSL
PVTEEKPQRPNQMSGGRKKESVSSEHQEDTVVEHIDRPSKHQDKKLKKQAKKEAKRKAKV
SKNQVSPSDDADTAKLEEEVDHDGAEKEEDGITKDQEEESSSREDPSDADIEDNLESDTS
RCFSKLSLETSMTELSPSSQENMGVDPTGNQGVDGSMSSSNTDTLTSGTSGTSTSTIKQD
VNGEVQETRTTQTHSENWDLLNNGDLENKGDLNMNKAPVLNGHCENPLSETVCCLTNGRE
NSDMENGECIDDRNSVGAECNIGIPKVKHISNNDSVACDRTYCDKDDSLTQNGVHHIKND
INSELKKSHSRNSSASEMTAKLGNMILEDTTSVSNRDDCHKENGVHDPVCGGSNCEKGST
NTPPQHHSKSEKEIKKEALVRSKVTLGVRYHPTSRECTVMSCIHQFTSAELLTGNNKFGC
AKCTQMKYKQGLSKDKKEKVYSSAAKQYLIYTPPAVLTLHLKRFEQVGFSSRKVNRHVDF
PFVLDLAPFCSSLCQGVRPGQKKILYALYGVVEHSGRLNAGHYTAYVKVRPNIGIITDFL
NAGPPTLKDCTKRYLEVQNSTASLEEQEESIVERLVPPGKWYHISDSRVSETTESTVQRA
QAYLLFYERIY
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagagttctggagtcaggggcgacaccgtcgtacaacatgggaaagaacaagaagcac
aaacttcgtaagaccaaagacgtgtctgactcctcagatgatgcattagcagtgccaagc
tgtaaccatattaatatggcagtgaatgtagcagccatgaggaaggggttagggaaacaa
gtgtatggagagtgtgcttcttgtaccaaaactgcccttgagggagactcgagccagggg
gcagaggctgctcctgcactccttgacacagagccaacactctgggtgtgcttacagtgt
ggaaatcaaggctgtgaccgtaactctagagataagcatgcattgaagcattacgagaca
ccacgctccagttgtcactgtttggtcatcaacactacttcttggactgtgtggtgttac
aagtgtgatgatgaggtccagttagaacaaagtaagaggctacaggagagtgtggacatc
attaggaaacaggctgggcttccccaggcagaaccagtccgtaagcagagtcagtcagta
agctctacgtctgttgtggaacaagcctttaaaccatccacctctacaccaaggtcatca
ggaatgtgttcaaaggtcaagggattgagtaaccttggaaacacatgtttctttaatgct
gttatgcagaatttgacacaaaccccatgtatagagtctgtagtagtagagagaagtaag
aaggggcggttgagttcattgtcctgtaagcgggacagtgacctagattctagctcaggg
tcagaggacagtgatgatgaagcttcaatagatctatctccaatagagatcgttctacca
gaagctgggcctctgacacagaccatgatagcatttctacaggagatgaacaactccaca
ggacgcacgagtactgtcaacccatcaccattgttcactcagatctgtaaaaaagctcaa
agatttcgaggctttcagcagcaggacagccatgaacttcttcgctacctgctggacaac
atgagaacggaggaaataaagagaggacaggctggaatattgaagcatttcaagctgcca
gaaaatgtgaatccaaagaaagtggatgatgacactaaaatcaagatcaaagaatatggt
cgtcaagtgaagtacacctttgtggattccttgtttgggggatacctaatgagcactgtc
acctgtgaggaatgtaaaaatatatcacagatatttgaaccatttttggatttgtcactc
ccagtcacagaagaaaagccccagcgacccaatcagatgtcagggggacgcaagaaagag
agtgtgagctcagaacaccaagaggacactgttgtagaacacattgatagaccaagcaaa
catcaagataagaagctcaagaaacaggcaaaaaaggaggccaagaggaaagccaaggtc
tctaaaaatcaggtgtctccctcggatgatgctgatacagcaaagttggaagaggaggtt
gaccacgatggggcagagaaggaagaagatggcatcacgaaagaccaggaggaggagtca
agcagtcgggaggacccctcagatgctgatattgaagataacctagaaagtgatacctca
agatgttttagtaaactcagtctggagacttccatgacagaactctctccatcttctcag
gaaaacatgggtgtggatccgacaggaaatcagggagtggatgggagtatgtcgagcagc
aacacagatactctgacctcaggaaccagtggaactagcacctcaacaatcaaacaggat
gtcaatggggaggtgcaggaaacaagaaccactcaaacccacagtgaaaattgggacctt
ctcaacaatggggacctcgaaaataaaggggatcttaacatgaacaaggcaccagtgctg
aatggtcattgtgaaaatccattgtctgagactgtatgctgtctgactaatggtagagaa
aatagtgatatggagaatggggaatgtattgatgatcgtaattcagttggtgcagaatgt
aacattggaattccaaaagttaagcatatatcaaataatgatagtgtggcctgtgatagg
acttattgtgataaagatgactctctgactcagaatggagttcatcacatcaagaatgat
ataaacagtgagttaaagaaatcccattccagaaatagcagtgcaagtgaaatgacagca
aagctagggaatatgattctagaggacactacctcagtcagtaatagggatgattgccat
aaggagaacggagtccacgatcctgtgtgtggtggatcaaattgtgagaaaggaagcacc
aacactcctccccaacaccattccaaatctgagaaagaaatcaagaaggaggcactagtc
aggtcaaaggtcacactgggggtacggtaccacccgacctccagggaatgtaccgtcatg
tcgtgcatacatcagttcacctctgctgaactcctgactggcaacaacaagtttggatgt
gccaagtgcacgcaaatgaaatacaagcaaggtctcagcaaagataagaaggagaaagtc
tattctagtgcagcaaagcagtatttgatatatactcctccagcagtgcttacgttacac
cttaagcgatttgaacaggttggcttcagttcccgcaaggtaaacagacatgtggacttc
ccctttgtccttgacttggcccccttctgtagctcattatgtcagggggtgagaccaggc
cagaaaaaaattctgtatgctctctacggagtagtggaacatagtggcaggctcaacgcc
ggtcactacaccgcgtacgtcaaagtccgaccaaacatcggaatcatcacagacttcctc
aacgctggaccgcccacattgaaagactgcaccaagcgctacctggaggtccagaacagc
actgccagtctggaagaacaggaagagagtatagtggagcgactggtaccgcctggcaag
tggtaccatatcagcgatagccgagtgagtgagaccacagaatctacggtccaacgagca
caggcctatcttctcttttacgaaagaatttattaa
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