Magallana gigas (Pacific oyster): 105332195
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Entry
105332195 CDS
T03920
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105332195
Spliceosome [BR:
crg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105332195
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105332195
NCBI-ProteinID:
XP_011432970
UniProt:
A0A8W8I0C0
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Position
LG10:complement(19216849..19247977)
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AA seq
405 aa
AA seq
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MAEVATQVTVPILDMNMFMSNIKTDFQGKVGPSVTQISGSTYEENKENEGHVEHMVQNQM
TSAYPYAAQTGIDEYGHPQQVVVTSQPVSVAASAEQAATFKADSATYPTTTVAANGGVEQ
QTGLPRAYPYEEMLAGINKQTDLEAEQSSAQQGTTTTPNSVGPKRLHVSNIPFRFREADL
KSLLGQFGKIIDVEIIFNERGSKGFGFVTFESNADADRAREKLNGTVVEGRKIEVNNATA
RVMTKKSVAAPTIPNAAALRGVALTRGRAAAVAARGAYNAAALAATAAFRHTTPLATAAT
ALPLAGVYQDPFLATYAAADRYQLVTSQPYPTAAAAYAPGARYAIPAALASPGTYAAAAA
AGQLQLAGREYTTATTDQLLGHSIGPVAGYGATLYRGAYQRFTPY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtagccacacaagtcacggttcctattctcgatatgaatatgttcatgagt
aacatcaagacagactttcaggggaaagttggtccatcagtgacacagatttctggaagt
acatacgaagagaacaaagaaaatgaaggtcatgttgagcacatggtgcagaatcaaatg
acatctgcatacccgtatgcggcacagacagggatagatgaatacggccacccccagcaa
gtggtggtcactagtcagcctgtctcagtggcggcctcagctgaacaggcagccacattc
aaagcagactctgccacctaccccaccaccacagtcgccgccaatggtggtgtggaacag
cagacgggacttccacgtgcatacccttatgaagagatgctggcggggatcaacaagcag
acagacttggaggctgagcagtcctccgctcaacaaggaacaacgaccacccccaactcc
gtgggaccaaaacgtcttcatgtgtcaaatatccccttccgtttccgggaggccgatctt
aaaagcctgttagggcaatttggaaaaatcatcgatgtcgagattatttttaatgaacgt
ggatctaagggattcggttttgtaactttcgaatctaatgcggacgccgacagagcacga
gagaaattgaacggcactgtggttgagggcagaaagattgaggttaacaatgccactgct
cgagttatgaccaaaaaatctgtggctgcacccactatcccaaatgcggcagctctaaga
ggtgtggcacttacacggggcagggccgcggcagtggctgctcgcggtgcttataatgcc
gccgctctagcagccaccgcagctttccgacatacaacaccactggcaaccgcagcaact
gcgttgcctttagctggtgtgtatcaggatccctttttagccacatacgcagcagctgat
agataccagttggtgacatcccaaccctatcccacagcagcagcagcctatgctccaggt
gctcgctacgctatcccagcagcccttgcatcgccaggcacatacgctgccgcagctgct
gcaggccagttacagctagcgggaagagagtacaccacagcgaccactgaccagttactt
ggtcacagtattggacccgtagccggttatggagccacgttgtacagaggtgcttaccag
cggttcacaccttactga
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